| New model in OGS2.0 | DPOGS205826 |
|---|---|
| Genomic Position | scaffold547:- 72193-79401 |
| See gene structure | |
| CDS Length | 2103 |
| Paired RNAseq reads | 6 |
| Single RNAseq reads | 14 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010939 (0.0) |
| Best Drosophila hit | ionotropic receptor 40a (3e-118) |
| Best Human hit | glutamate receptor delta-1 subunit precursor (2e-08) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP004021-PA [Tribolium castaneum] (1e-164) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP004021-PA [Tribolium castaneum] (3e-158) |
| GeneOntology terms | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
| InterPro families | IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 |
| Orthology group | MCL18411 |
Nucleotide sequence:
ATGATATTGACATACATTATTCTGCTGTGTGTTCGAGATACTCAATGTCTCTTTGAGGTT
CGTGACTCGGTGGATGTCAACTTGAAACAACTCCCCAAAGACTTTTCAAAAGCAGTTGTT
GATATTGCAATAGGTTTACCCACGAATACTATAACCGTTGTGCGCGGGAACTCTACTGAT
GTCAGAGATGCGGACATATTTGAATTGTTCTGCAGCCTTGGTGATAATAATATTCAGGTT
ACAAACTTGGATCTAATGACGCCGGAAAGTAAAGATATATATTATAAATATTTGAAAGAA
GGACTCGATAATTCCGAAGAAAGGACTAGTTTAATTCTGTGCAAACCAAAAGAGTGTGAA
GATTTGCTTCTAGAGGTCACAAGCAACAACTTCATACACCGTCCAATCCTCTATATTTTC
TTCTGGTCCGAAGACGAGGTCCCCAAAAATTTCACCACCTGCATCAAGGAGGCCGTCAGA
GTTGCTGTCATTACAAACCCAAGGAAAGGCGTGTTTCGCCTTTACTACAATCAAGCAAAC
CCAAACAAGCCCAGACACTTGAAGTTAGTAAACTGGTGGGCAGGTCAACTCTATAAGTCA
CCATCACTACCGCCAGCCAATAAAGTATATGAAGATTTTCAAGGACGAATATTAAATGTA
CCGGTATTGCATGCTCCGCCGTGGCACTTCGTTCGATACATGAACGATTCAACAGTTAAC
GTGACTGGAGGGAGAGACCACAAACTGCTCTCATTGTTGGCCAAGAAGTTAAACTTTAAG
TATAAATACTACGATCCACCCGAACGGAGTCAAGGATCGAGGATATCCGGTAATGGCACA
TTTAAAGGCACACTCGGACAAATTTGGCAAAGGAAAGCAGACTTCTTTATCGGTGACGTC
ACAATGACTTGGGAAAGGCTACAAGCTGTGGAATTTTCGTTTCTGACCCTAGCAGATTCC
GGCGCGTTCCTCACTCACGCTCCTGATAAGTTGAGTGAAACCCTGGCCATTATAAGACCA
TTTCGATGGGAGGTATGGCCGTTGGTATTCGCCACAATCCTGGTAACGGGTCCAGCACTG
TGGGTGGTAATCGCAACACCGTATATTTGGCAACGTCGTGAACGAGACCAGATGGAACTG
TTGAATAATTGCTGCTGGTTCACCACTTCATTATTCTTGAGACAAACAACTAGGAAAGAG
CCTTCCACGTCAAACAAAGCTCGCCTTGTGTCCATTCTCATATCTTTGGGTGCAACTTAT
GTCATCGGTGACATGTACTCGGCTAATCTCACCAGTCTAATGGCTCGCCCGTCCAAGGAA
CAAGCGATTGGTACTCTTGTAGCTCTAGAAGAAGCCATGAGAAATGATGGCTACGAGCTC
GTTGTGGAAAGTCACAGCTCTTCGTTAGCTATTCTACAGAATGGAACAGATATATATGGT
CGTCTCGCTCGTCTCATGCGACGCCAACGCACCCAGAGAGTTAAAAGTGTGGAGGTTGGT
GTTAACATGGTGCTATCAAAGAGAAGAATCGCAATCCTCGGTGGAAGGGAAACTCTATTT
TACGATACCGAGAGATTTGGTTCGCATAATTTTCATTTGAGCGAAAAATTATATACAAGA
TACTCAGCTATCGCTCTGCAGATAGGATGCCCATACTTAGAAACATTCAACAACGTGCTG
ATGACACTATTTGAAGCAGGTATACTAACAAAAATGACATCGGACGAGTACAGGAATCTT
CCAGAACAATCACGAAGATCGGAAAAGGTGACGGAGAGTGAGAGTAAAGAAAACAACGAC
GTCACAGAGAACTCACCAACCGCGCAAATTCAACCAGAATCCACAATCGGTCTGGAGCCT
GTATCCCTTACAATGCTACGTGGCGCATTTTGTCTCCTCGGTATTGGATATTTTATTGCA
GCTGTAGTTCTAGCAACAGAAATAGAAATACAGCGTAGGAAAAGATCGAGAGCTGAAAGG
GTCATGGACACTTCACTTTTTCCCAAATCTCCTAGAATGTATCTGAGACACTATTTAATA
AGAATTTTCAGAACAATGTACAACATTGTTGACGGAGCCTTGCGACCAGAAATGAAGGAA
TGA
Protein sequence:
MILTYIILLCVRDTQCLFEVRDSVDVNLKQLPKDFSKAVVDIAIGLPTNTITVVRGNSTD
VRDADIFELFCSLGDNNIQVTNLDLMTPESKDIYYKYLKEGLDNSEERTSLILCKPKECE
DLLLEVTSNNFIHRPILYIFFWSEDEVPKNFTTCIKEAVRVAVITNPRKGVFRLYYNQAN
PNKPRHLKLVNWWAGQLYKSPSLPPANKVYEDFQGRILNVPVLHAPPWHFVRYMNDSTVN
VTGGRDHKLLSLLAKKLNFKYKYYDPPERSQGSRISGNGTFKGTLGQIWQRKADFFIGDV
TMTWERLQAVEFSFLTLADSGAFLTHAPDKLSETLAIIRPFRWEVWPLVFATILVTGPAL
WVVIATPYIWQRRERDQMELLNNCCWFTTSLFLRQTTRKEPSTSNKARLVSILISLGATY
VIGDMYSANLTSLMARPSKEQAIGTLVALEEAMRNDGYELVVESHSSSLAILQNGTDIYG
RLARLMRRQRTQRVKSVEVGVNMVLSKRRIAILGGRETLFYDTERFGSHNFHLSEKLYTR
YSAIALQIGCPYLETFNNVLMTLFEAGILTKMTSDEYRNLPEQSRRSEKVTESESKENND
VTENSPTAQIQPESTIGLEPVSLTMLRGAFCLLGIGYFIAAVVLATEIEIQRRKRSRAER
VMDTSLFPKSPRMYLRHYLIRIFRTMYNIVDGALRPEMKE