| New model in OGS2.0 | DPOGS207850 |
|---|---|
| Genomic Position | scaffold5106:- 101-2102 |
| See gene structure | |
| CDS Length | 621 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 13 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009815 (1e-73) |
| Best Drosophila hit | ND |
| Best Human hit | mutS protein homolog 4 (2e-33) |
| Best NR hit (blastp) | predicted protein [Nematostella vectensis] (2e-40) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_223065 [Branchiostoma floridae] (9e-38) |
| GeneOntology terms | GO:0006298 mismatch repair GO:0005634 nucleus GO:0007126 meiosis GO:0030983 mismatched DNA binding GO:0007131 reciprocal meiotic recombination GO:0005524 ATP binding GO:0000795 synaptonemal complex GO:0003677 DNA binding GO:0001541 ovarian follicle development GO:0007283 spermatogenesis GO:0007292 female gamete generation GO:0007129 synapsis GO:0000166 nucleotide binding |
| InterPro families | IPR007860 DNA mismatch repair protein MutS, connector |
| Orthology group | MCL17178 |
Nucleotide sequence:
ATGAATGTGATTCAATCTGATAAGCGTCCCTTTAAATCGTTTACTAAAACTAAAAATGAA
TTGGTACGCAAGGATGCCGCAATGGCTATATCTGAAGGTCGGGGGATGGCTCGGGGTGAG
ATTGGTATAGCAGCTGTGGATTTGAGACGTCCAAATCTGATTCTCTGCCAGTTCAGTGAC
ACGCTCCTATACACACACACACTCACCAAGATAAACTACTTCAATCCCATTGAAATAATA
GTACCTCACACATTCTGCGAAGGTGCCCAAACCAATCAGCTGTACCAGTTAATAAAGGAT
CACTTCCCATTAGTTAACGTAACAGCTGTTCAGAGGAGACATTTCAACGACGCAGCCGGG
AGGCAGAACATACACACGCTATGCGCCCCTCAGTACAGCGCTGTATATCTCCTTGTTATA
CATAAATTTTATGCCCTAACAGCTGCCGCGGCTGTTCTGAAGTACGTGGAATATATACAG
TGTATTGTTTTCGCTAGAGAATCTCTGAAGATCGAGTATCACTCGTCCGAAAACACTATG
ATTATTGGTATCACATATATAATACATTTTCATATATATCAGTATATTTTGCTACAAGTG
CCGCCATCAGTGCCGTACTAA
Protein sequence:
MNVIQSDKRPFKSFTKTKNELVRKDAAMAISEGRGMARGEIGIAAVDLRRPNLILCQFSD
TLLYTHTLTKINYFNPIEIIVPHTFCEGAQTNQLYQLIKDHFPLVNVTAVQRRHFNDAAG
RQNIHTLCAPQYSAVYLLVIHKFYALTAAAAVLKYVEYIQCIVFARESLKIEYHSSENTM
IIGITYIIHFHIYQYILLQVPPSVPY