New model in OGS2.0 | DPOGS201856  |
---|---|
Genomic Position | scaffold1259:- 11345-12476 |
See gene structure | |
CDS Length | 738 |
Paired RNAseq reads   | 252 |
Single RNAseq reads   | 790 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006105 (7e-47) |
Best Drosophila hit   | CG17652 (1e-30) |
Best Human hit | rRNA-processing protein UTP23 homolog (1e-33) |
Best NR hit (blastp)   | PREDICTED: similar to CG17652-PA [Nasonia vitripennis] (2e-58) |
Best NR hit (blastx)   | PREDICTED: similar to CG17652 CG17652-PA [Tribolium castaneum] (9e-47) |
GeneOntology terms    | GO:0005634 nucleus GO:0042254 ribosome biogenesis GO:0006364 rRNA processing GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
InterPro families   | IPR006984 Protein of unknown function DUF652 |
Orthology group | MCL14725 |
Nucleotide sequence:
ATGAAGATAACGCGTTATAAAAAAGTTCAAAAATATCTAAAGTTCTATTACAATAACTTT
GGGTTTCACCAACCATACCAAGTCTTAATTGATGGCACCTTCTGTTTCGCAGCCTTTAAA
GAACACATTAATGTAAGGGAGCAACTACCTAAATATCTCAATGGTAATGTCAAACTATTA
ACTACAAGGTGTATAATAAAAGAAACTGAAAAAATAGCTAAAAAGACCCACGGGGCCCTC
ACAATTCTTAAACAATTTGGTATTCACGAGTGTGATCATAAAGAGCCAGTGTCAGGCGCT
CAATGCATATTGTCCATGATAGGGAAGGGCAATCAAAAACATTACATTTTGTCAACTCAA
GATAGAGATTTACAGGAGAAGATGAGGAATAGAGCTGGTGTTCCACTGCTCTACTTACAT
AACAAGTCTCCTACACTCGAGAAGCCATCAAAGGCAAGTTATGATAAAGTCGGTCATTCA
CTAGAGACAAATCCGTTTATAAGTGAAGCACAGAACGAAACATTAAAAAAGATTAAGAAA
GCCCTGGGTGTTGAAGAAACAGTTGACAATACTAAAGTTATCATTAAAAAGAAAAAACCT
AAAAATCCTAACCCATTATCATGTAAGAAAAAGAAAAAGAAGCCGGCTGACAGACAAACT
ATTAAAAAAGATGGAGTTGCAGAGGGCAAAGTGAGAAAAAGGAAGAAGATTAACGATAAA
ATTACCGCCGTTGTTTAA
Protein sequence:
MKITRYKKVQKYLKFYYNNFGFHQPYQVLIDGTFCFAAFKEHINVREQLPKYLNGNVKLL
TTRCIIKETEKIAKKTHGALTILKQFGIHECDHKEPVSGAQCILSMIGKGNQKHYILSTQ
DRDLQEKMRNRAGVPLLYLHNKSPTLEKPSKASYDKVGHSLETNPFISEAQNETLKKIKK
ALGVEETVDNTKVIIKKKKPKNPNPLSCKKKKKKPADRQTIKKDGVAEGKVRKRKKINDK
ITAVV