| New model in OGS2.0 | DPOGS210914 |
|---|---|
| Genomic Position | scaffold3093:- 18321-19212 |
| See gene structure | |
| CDS Length | 810 |
| Paired RNAseq reads | 375 |
| Single RNAseq reads | 1438 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003065 (8e-27) |
| Best Drosophila hit | cuticular protein 31A (6e-16) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein RR-2 motif 59 [Bombyx mori] (8e-40) |
| Best NR hit (blastx) | cuticular protein RR-2 motif 59 [Bombyx mori] (2e-26) |
| GeneOntology terms | GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | ND |
Nucleotide sequence:
ATGGCAGCTAAGTTGGTTGTAGTACTCGCCGCCGTGGCCGCTGTGGCTCACTGCTCAGTG
GTGCCAGTTGCGCGAGCAGACGCCGACTACACGAGCTTCGCTTACGACGTCGCTGACCCT
TACACCGGTGACTTTAAGAGCCAAGTTGAGACCCGTGTTGGTGGCAACGTACAGGGACAA
TACTCACTACTTGACGCTGATGGCACAAAACGCACAGTTGACTATACTGCTGATGACGTC
AATGGATTCAATGCAGTAGTTCGCAAAGACCCTGCAGTTATTGCAGCTGCCCCAGCTGTT
GTTGCCTCAGCTCCAGCCGTTGTTGCCTCAGCTCCAGCCGTTGTAGCTTCAGCCCCAGCG
GTTGTTGCCTCAGCACCATCTGTTGCAGCTGCTGGTCCTGCCGTCGTAGCTGCACGAACA
TTTGCCGCTCCTGCTGTTTATGCTGCATCTGCTCCGGCAGTAGTTGACAGTCGCACTCTT
TCTGGAGCAGCTGTCTACGCTGCAGGTGTACCAGCTGTAGTCGCTGCCCGTACAGTCCAT
TCTCCAGCTATCTACGCTGCATCTGCCCCCGCAGTCTTTGCTTCCCGTACAATTGCCTCT
CCTGCAGTTTACGCCTCTTCCCCTGTATCTTACGCAGCCTCCGCTCCGTCTCTCTTAGCT
AAAGCCTATGGTGCTCCTTCCTACTATGCTGCATCTTACGCAGCACCGTGGTATTCTGCA
GCCGGCCACGGTCTTCTCGCAGCCCGTGCCTATCCCTCACCATACTATGCTGCCTACGGC
GTACACCCCGCCCCTCTTAATTACTGGTAA
Protein sequence:
MAAKLVVVLAAVAAVAHCSVVPVARADADYTSFAYDVADPYTGDFKSQVETRVGGNVQGQ
YSLLDADGTKRTVDYTADDVNGFNAVVRKDPAVIAAAPAVVASAPAVVASAPAVVASAPA
VVASAPSVAAAGPAVVAARTFAAPAVYAASAPAVVDSRTLSGAAVYAAGVPAVVAARTVH
SPAIYAASAPAVFASRTIASPAVYASSPVSYAASAPSLLAKAYGAPSYYAASYAAPWYSA
AGHGLLAARAYPSPYYAAYGVHPAPLNYW