| New model in OGS2.0 | DPOGS206779 |
|---|---|
| Genomic Position | scaffold10988:+ 1557-3839 |
| See gene structure | |
| CDS Length | 849 |
| Paired RNAseq reads | 104 |
| Single RNAseq reads | 409 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010697 (3e-98) |
| Best Drosophila hit | Tfb4 (1e-62) |
| Best Human hit | general transcription factor IIH subunit 3 (6e-42) |
| Best NR hit (blastp) | transcription factor TFIIH-subunit, putative [Aedes aegypti] (4e-81) |
| Best NR hit (blastx) | transcription factor TFIIH-subunit, putative [Aedes aegypti] (8e-78) |
| GeneOntology terms | GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016251 general RNA polymerase II transcription factor activity GO:0005675 holo TFIIH complex GO:0006355 regulation of transcription, DNA-dependent GO:0006281 DNA repair GO:0000439 core TFIIH complex |
| InterPro families | IPR004600 Transcription factor Tfb4 |
| Orthology group | ND |
Nucleotide sequence:
ATGGCAGACGACGAAGCGCCTTCAGATAGCAGTCTCCTAGTAATAATTGTTGATACGAAC
CCCAACCAGCGGTATATCACCGAAGATCCAAAAGTTTTGACCGGTTGTTTAGACGCGGTT
ATCGCATTCGCGAACTCCCACCTTATGCAAAAATCCAGAAATCAACTAGCGGTTATTGGG
TGTCATTTTCATAAAAGTGAATATCTGTATCCATCACCTGGGAAACCCTTAGATGTGAGA
CAAATTGATGGGCAATATGAATTGTTCACACTCGTAGAAAAGACTATTAAAATGAGATTA
GTGAATTTAATAAAGAGTCAACCTCAAGAAGAACGGCCGGGTGAATCGCTGCTGGCTGGA
GCCATGGCTATGGGGTTATGTTTTATTGCTAGAATGCGTCGTGAACAGCCGCCGGGACTG
CGTATGGTGAGCAGGATGTTGGTAGTGACGGGGAGCTCGGACACAGCCGCGCAGTACATT
AACTATATGAATGTATTTTTTACTGCACAGAAACAACAAGTGTTGTTGGACGTGTGTTCG
TTGGACAAACATCTGAGCTTATTACAGCAGGGTTGCGACATCACAGGAGGCTTATATTTA
AAAGTACCCTCGCTTGAAGGACTCTTGCAATATCTATTGGTAATATATGCTATGAAGGTT
TTGACTTGGATAAGGCTATATTCTGTTTGGAAGAATAGATTGTGTACCTTTTTTTTTTAC
ACTAAAGAAAAAATTAAAGATAATGAAAAAAAAGCTCTGGAGATTTCGTATCAATGTATC
TTTGATAAAAAAGAAATGGTTGTGAAAAGTAAGAATGGAATGAAGTTTGAGGCTCGACTT
TGTTATTGA
Protein sequence:
MADDEAPSDSSLLVIIVDTNPNQRYITEDPKVLTGCLDAVIAFANSHLMQKSRNQLAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEERPGESLLAG
AMAMGLCFIARMRREQPPGLRMVSRMLVVTGSSDTAAQYINYMNVFFTAQKQQVLLDVCS
LDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLVIYAMKVLTWIRLYSVWKNRLCTFFFY
TKEKIKDNEKKALEISYQCIFDKKEMVVKSKNGMKFEARLCY