| New model in OGS2.0 | DPOGS213283 |
|---|---|
| Genomic Position | scaffold2132:- 16936-27532 |
| See gene structure | |
| CDS Length | 1791 |
| Paired RNAseq reads | 46 |
| Single RNAseq reads | 118 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001777 (1e-31) |
| Best Drosophila hit | crooked legs, isoform D (2e-23) |
| Best Human hit | zinc finger protein 782 (1e-30) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_133163 [Branchiostoma floridae] (1e-40) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_202102 [Branchiostoma floridae] (3e-45) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005739 mitochondrion GO:0005622 intracellular GO:0008270 zinc ion binding |
| InterPro families | IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR022755 Zinc finger, double-stranded RNA binding IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGATCATAGAAATCGGTACGGAATCCTTCAAGCGCCAGTCCGACTCTCCTCACTTATAC
ATTGCGATGACTCTCCCAGATCAGAGTAATTTAGTAAGATGGGGCAAAGGTACCGAAAAA
ACTTGCTACATCTGCGGGGAGGCAGTTGGAACGGCTAAGCACTTGCTGGTGGGATGTAGG
GTACTCCTGGATAGCGGTCAATACTCGCGTCGTCACGATAGGTTTTTAGAAATCATACGT
GAAGCTGTTCAGACCTCACTGAGTTCGTGTATTTGTACGTACTGTGAATGTTTATTGAGA
AAATTGACGAAATTTATAAGACAATGCATAAGATCCGAGGAATTGTTGCGGACTGAACAC
AAACAGATTAGTTCATTGCCGTCTGTAGTACAACTTTCTATTTCCGACACAAAAAACTAT
TATCTCGGACCCGAAGAGGTTGTTGCTGGTATCAAAGACGAGGGTAGTTTCATCGAGGAG
GACGACATCCCTCTTGTATTCCTGAACGAACATTATGCCTGCGAGGACGATGATATAGAG
GGTCAGTCGGATGTCAAGTTGGAGAAAGATGATTATAAGATCGCAGAAAGAAAAAAGATA
AAGAAAGATGTGAAAGAAGGATTTTCATCGCGAATGGTGACTGAGACCGAGGAGTACGTC
GTCATTAAATTGACTAAGGAACAGATTTTAGAGGAAATGCATCAACAGTCGATGACAGAG
AAGTACAAAGTGCTTCCATACAAGTGCGACAAGTGTGTCCGCGGCTTTAACTTCGAGGAC
GTTTTACGGAAGCACATGGAGAAACACGATTCTAAAAATGGACCATTCCAATGCGAACTG
TGCACCCAATACTGTCCAACGAAGGTTTCATTGAGGGGACATTTGAAGTCGCATTCAACA
AGGTATAAATGTAAATTGTGCGGTATCGTGCGCTTGTCGCGACAGCACGTTTTGGAACAT
TACTCACTAGAACACACACACACAGCCACCGTATACAAATGTCCGCAGTGCGAACACACA
ACTAATAAGCGAACAGCCATGCAGCGTCACGTGCGACTCCACTCGAAATGCGAGCCGGTC
AAGTGTGATCTGTGCGGAAAAACTTACAAGAGCAAAGAATCTCTCCGAATACACATAATG
CGTCACGACGAGCAGAAGCTGCATCAGTGCGAGTTCTGCAGCAGCAGCTTCGTGTACGCG
GCGCAGTTAAGGAAACACATACGCTCGGTGCACGAGAATAAGGACTATTATTGCGTGGAA
TGTGACATAATGTTTAAATCCATGGATAACTTGAAGCAACATTTGCAAAGAGCAAAACGT
CACAGGGATTCTTCGTCGTACAAATACACGTGCCCTCAATGCCCAGAAAGATTTATCTCC
CAATCAACGCTAGCCACCCATAGGACAAACGCACACGGAGCGGCCAAGAGCGAGAGCTGT
TCCGTGTGCGCCAGGAAGTACAGCAGCCTGGAGGCGCTAAGGTGGCATACACGGAGGTGT
CACACTACCGAACATACCAGGATAAAGTGTGACGTCTGCGATAGGAGCTTCTCGCGAGCC
TACGTCCTCCGTGTGCACATGCGCACACACACAGGGGAACGCCCGCACATGTGTGAGTGT
GGTGCGACCTTCACGCAGGCCGCGGGTCTTAGAGCTCATGTGGTGGCGAGGCATAAAATT
CACAAACCGCCCCAACAGATGGCGCTGTCTGTATGGAGGTTATTTAACACGAGAAGCCCG
CGACGCAGGTCACTAATGTACTGTCTTAACACCCTGTATACATCCCTCTGA
Protein sequence:
MIIEIGTESFKRQSDSPHLYIAMTLPDQSNLVRWGKGTEKTCYICGEAVGTAKHLLVGCR
VLLDSGQYSRRHDRFLEIIREAVQTSLSSCICTYCECLLRKLTKFIRQCIRSEELLRTEH
KQISSLPSVVQLSISDTKNYYLGPEEVVAGIKDEGSFIEEDDIPLVFLNEHYACEDDDIE
GQSDVKLEKDDYKIAERKKIKKDVKEGFSSRMVTETEEYVVIKLTKEQILEEMHQQSMTE
KYKVLPYKCDKCVRGFNFEDVLRKHMEKHDSKNGPFQCELCTQYCPTKVSLRGHLKSHST
RYKCKLCGIVRLSRQHVLEHYSLEHTHTATVYKCPQCEHTTNKRTAMQRHVRLHSKCEPV
KCDLCGKTYKSKESLRIHIMRHDEQKLHQCEFCSSSFVYAAQLRKHIRSVHENKDYYCVE
CDIMFKSMDNLKQHLQRAKRHRDSSSYKYTCPQCPERFISQSTLATHRTNAHGAAKSESC
SVCARKYSSLEALRWHTRRCHTTEHTRIKCDVCDRSFSRAYVLRVHMRTHTGERPHMCEC
GATFTQAAGLRAHVVARHKIHKPPQQMALSVWRLFNTRSPRRRSLMYCLNTLYTSL