| New model in OGS2.0 | DPOGS213284 |
|---|---|
| Genomic Position | scaffold2132:- 8375-11470 |
| See gene structure | |
| CDS Length | 486 |
| Paired RNAseq reads | 88 |
| Single RNAseq reads | 486 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001806 (5e-87) |
| Best Drosophila hit | CG3689, isoform C (5e-82) |
| Best Human hit | cleavage and polyadenylation specificity factor subunit 5 (3e-75) |
| Best NR hit (blastp) | cleavage and polyadenylation specific factor 5 [Bombyx mori] (2e-88) |
| Best NR hit (blastx) | cleavage and polyadenylation specific factor 5 [Bombyx mori] (2e-89) |
| GeneOntology terms | GO:0005849 mRNA cleavage factor complex GO:0006379 mRNA cleavage GO:0016787 hydrolase activity |
| InterPro families | IPR000086 NUDIX hydrolase domain IPR016706 Cleavage/polyadenylation specificity factor, 25kDa subunit |
| Orthology group | MCL12170 |
Nucleotide sequence:
ATGAGAGAGGAATTCGCGAAAATTGGCATGCGAAGGTCCGTCGAAGGTGTCCTCCTCGTT
CATGAACACGGCTTACCTCATGTGCTACTCCTTCAATTAGGAACGGCCTTCTTCAAACTT
CCCGGCGGAGAGCTGAATCCCGGAGAAGACGAGATCGAGGGCCTGAAGAGACTTCTCACA
GAGACCCTTGGACGGCAGGACGGTGTCAAGCAGGAATGGCTCATAGAAGACACCATCGGC
AACTGGTGGAGGCCCAACTTCGAGCCGCCCCAATATCCTTATATACCGCCCCACATCACC
AAACCGAAGGAGCACAAGCGCTTGTTCCTCGTGCAGCTTCAAGACAGAGCGCTGTTCGCT
GTCCCCAAGAACTACAAACTAGTCGCAGCGCCTCTGTTTGAGTTGTATGACAATGCACAA
GGCTACGGACCTATTATATCATCGTTGTCACAGAGCCTGTGCAGATTTAACTTTACTTAT
ATGTAA
Protein sequence:
MREEFAKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIEGLKRLLT
ETLGRQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFA
VPKNYKLVAAPLFELYDNAQGYGPIISSLSQSLCRFNFTYM