| New model in OGS2.0 | DPOGS212734 |
|---|---|
| Genomic Position | scaffold10:+ 171678-175282 |
| See gene structure | |
| CDS Length | 1434 |
| Paired RNAseq reads | 48 |
| Single RNAseq reads | 134 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011983 (7e-151) |
| Best Drosophila hit | CG1640, isoform F (2e-144) |
| Best Human hit | alanine aminotransferase 2 isoform 1 (3e-134) |
| Best NR hit (blastp) | Alanine aminotransferase, putative [Pediculus humanus corporis] (6e-163) |
| Best NR hit (blastx) | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (2e-158) |
| GeneOntology terms | GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity GO:0009058 biosynthetic process GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR004839 Aminotransferase, class I/classII IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR001176 1-aminocyclopropane-1-carboxylate synthase |
| Orthology group | MCL10566 |
Nucleotide sequence:
ATGGCGTCTATGACAATACAAAATCTCAGCCCAAATATTCTTCAAATGGAATATGCTATT
CAAGGACCAGTGGTAGCAAGGGCTGGTGAAATTGAAGAAGAGTTAAAAAAGGGAGTAAAG
AAGCCGTTCAAAAATGTTATTAGGGCTAACATCGGAGACGCACAAGCTATGGGTCAGCCC
CCGATAACATTCATAAGACAGATGATAGCTTGCATAGCATACCCTAAGCTTATAGAAGAA
GGAAATTTTCCCGAAGATGTTAGAAAAAGGGCAAAAGAATTCCTACAAGGATGCAGCGGA
GGCACTATTGGTTCGTACTCTATACCGCATGGTTTGGGCCACATTCGTCGTCGTGTCGCC
GAGTATATCGAGCTCCGTGATGGTGTACCAGCTGATTGGAAGAACGTCTACCTCTCAGCC
GGGGCTACTGTCGCCATACAGTACTGTTTACAGTTATTTAGCGATCGCAGTAACGGAAGA
AAAAATGGTATACTGACCCCGGTTCCCACTTATCCATTTTATTCGGCATGTTACTCAATA
TTCGGCATCAATCTAGTAGGTTATTATTTGGATGAAGACTCAAACTGGGACACGAAAATT
GAGGAACTGGAGCGAAGCCTTGTTGAGGCTCAAAATACTTGTAATGTGAGAGCACTTCTA
GTCATCAATCCTGGGAATCCAACTGGACAGGTTTTAAGCCGTAAGAACATCGAGGAAATT
ATCAAATTTGCATACAAGCATAATCTGTTTATTATAGCCGATGAAGTCTCTCAAGATAAC
GTGTATAGCGGAGGCAAACGATTCTATTCTTTCAGAAAGGTGATGATAGAGTTGGGTGCC
CCGTACTCGTCTATAGAGTTGGTATCCTTCACATCGGTAAGTAAAGGCTATATGGGTGAG
AGTGGGTTGCGAGGAGGCTGGCTGGAACTCAACAACATTCAACCGGATGTGCAAGCACAG
CTTTTTAAATACATATCTGCCATGGGAACGCCGAATGTCATCGGACAGGCTGTTATCGAT
TGCGTGGTAAAACCGCCATCTCCAGGCGAGCCTTCTTACGACTTATGGCTGAGAGAAAAG
ACAGCTGTGCTTGAATCTCTGAATGCGCGCGCTCGTTTGGTATCCGAGAGCCTTAATGCC
ATTGAAGGCTACAAATGTAATGTTGTGCAGGGGGCTCTGTACGCCTTCCCTAGGATTAAT
CTCCCTCCAAAAGCGGTAGCGGCAGCTGAAGAGGCTAATCAGCTTCCCGATGTGTTCTAT
GCCTACAGACTCTTGGAAGAAACTGGCATCTGCGTTGTCCCTGGTTCGGGCTTCGGTCAA
GTCCCGGGTACTTATCATTACCGAACGACCATCTTGCCGGAGTACGACCAGCTTAGAACT
ATTCTGGAAACCATCAGAACTTTCCACCAGCGGTTCATTGCACAGTACACGTAG
Protein sequence:
MASMTIQNLSPNILQMEYAIQGPVVARAGEIEEELKKGVKKPFKNVIRANIGDAQAMGQP
PITFIRQMIACIAYPKLIEEGNFPEDVRKRAKEFLQGCSGGTIGSYSIPHGLGHIRRRVA
EYIELRDGVPADWKNVYLSAGATVAIQYCLQLFSDRSNGRKNGILTPVPTYPFYSACYSI
FGINLVGYYLDEDSNWDTKIEELERSLVEAQNTCNVRALLVINPGNPTGQVLSRKNIEEI
IKFAYKHNLFIIADEVSQDNVYSGGKRFYSFRKVMIELGAPYSSIELVSFTSVSKGYMGE
SGLRGGWLELNNIQPDVQAQLFKYISAMGTPNVIGQAVIDCVVKPPSPGEPSYDLWLREK
TAVLESLNARARLVSESLNAIEGYKCNVVQGALYAFPRINLPPKAVAAAEEANQLPDVFY
AYRLLEETGICVVPGSGFGQVPGTYHYRTTILPEYDQLRTILETIRTFHQRFIAQYT