New model in OGS2.0 | DPOGS213110  |
---|---|
Genomic Position | scaffold2754:+ 166-10433 |
See gene structure | |
CDS Length | 1968 |
Paired RNAseq reads   | 1754 |
Single RNAseq reads   | 5202 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007869 (0.0) |
Best Drosophila hit   | CG1703 (0.0) |
Best Human hit | ATP-binding cassette sub-family F member 1 isoform a (4e-126) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP012249-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP012249-PA [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005215 transporter activity GO:0043190 ATP-binding cassette (ABC) transporter complex GO:0042626 ATPase activity, coupled to transmembrane movement of substances GO:0005524 ATP binding |
InterPro families    | IPR003593 ATPase, AAA+ type, core IPR003439 ABC transporter-like IPR017871 ABC transporter, conserved site |
Orthology group | MCL10501 |
Nucleotide sequence:
ATGGAATCTGAAGACGAAGAAGATGTTTTAAAACCCATTGTGAAAAAAGGAAAACATAGG
AAGAAAAACAATATTGATGATATAGAGGAAGAGCTGAAGAAGTTTGAGATCAAAGAAGAG
GAACCAGAAGAACAGGAAGATAAGCTTGAGGAAAAAACCGAAAAGAAATTGAGTCACAAA
GAGAAGAAGAAGCTGAAGAAGCAACAGGAATATGAGAAGCAGATGGAGTTACTAACTAAG
AAGGGCGGTCAAGGACATAGCGAGTTAGACGCTAACTTTACAGTTAGTCAAGCACAGAAA
ACGGCTGGTCAAATGGCAGCTCTAGAAAACGCAGTGGACATTAAAGTGGAGAACTTTTCG
ATTAGCGCTAAAGGTCAAGATCTGTTCGTAAATGCGACTCTATTGATAGCGAATGGTCGG
AGATATGGTCTGGTAGGGCCGAATGGTCACGGCAAGACTACTTTGTTAAGGCATCTGGCA
CAACGTGCCTTCCCCCTCCCACCCCATATAGATATACTGTTGTGTGAGCAGGAGGTCACC
GCTAGTGATATGAGTGCCGTTGATACACTATTAGAATCTGATGTCAAAAGGACAGAACTG
CTAAAGGAGTGTAAGGAATTGGAAGCGGATATTGAGAATGGTGACCTTAAGAAGCAAGAT
AGATTGAATGAGGTGTATGCCGAGCTGAAGGCAATAGGTGCAGATTCTGCTGAACCCCGT
GCTCGCCGTATTCTCGCAGGTTTAGGGTTCAGCAGAGAAATGCAAGATAGGGCTACCAAG
AACTTTTCTGGAGGTTGGAGAATGAGGGTCTCCCTCGCCAGGAATGGAAACAATAAAATA
AAAAATGTTCTTGAATTTTTATGTGACAAATGTAATAAAAATACTTTTAACTTGTTGCTA
CAAAAAAAAATATCACATCAGGTTTTATATTTTTATAATGAACAGACGCAAAAAATAGTA
TTTTTTCCCACATACCTAGTCGATCCCATAGTGAACTTATATAGTTCTACTCGACATGTC
ACTACATATTGTGTCACATTAAATAGTCCGTTTATAGTATACTTAATATTAGAAACGCAT
CCTCATGAAATGCTTAGTCTTAGTTTAGCAGGCGAGAAGAAGCAGAAGGACGCGTTAACG
AGGAAACAGGAGAAGAATAGGAGTAAGTCTCAGAGGGAAGAAGCGGAAGACGGGGCGGCG
CCGGTGACCCTCTTACAGAGACCCAAGGACTACCTCGTCAAATTTTCCTTCCCAGACCCC
CCACCACTACAACCGCCCATACTGGGACTGCACAACGTGGATTTCTTCTTCCCCGGCCAG
AAGCCTTTATTCAGGGAGGTTGATTTCGGTATCGACCTGAACTCGCGTATCGCTATCGTT
GGTCCCAACGGCGTGGGAAAGTCGACCTTCCTCAAACTTCTTGTGGGTGAATTGAGTCCT
ATCAGAGGGGATTTGATCAGGAACCATCGTTTGAGGATAGGTCGTTTCGATCAGCATTCA
GGAGAGCATCTCACAGCCGAGGAGTCCCCTGTGGAGTATCTGCAGAGATTGTTCGGTCTT
CAGTACGAGAAGGCGAGGAAGGCCCTCGGTACATTCGGTCTTCAGAGCCACGCCCATACC
ATCAAGATGAAGGATCTCAGCGGAGGTCAAAAGGCCAGGGTCGCGCTCGCCGAGTTAACC
TTGATGGCGCCCGATGTTATTATTTTGGACGAACCCACCAACAACCTGGACATCGAGAGT
ATAGACGCGCTGGCGGAGGCGATCAACGCTTACAAGGGCGGAGTGGTGATAGTGTCTCAC
GACGAGCGACTCATCAGGGAGACGGACTGCGCTCTCTACGTTATAGAGGACCAGACGATA
AACGAGGTGGACGGCGACTTCGACGATTACCGTAAGGAGCTCCTCGAGAGTCTCGGGGAG
ACGGTCAACTCCCCTTCGATCATCGCCAACGCGGCCGTACAACAATAA
Protein sequence:
MESEDEEDVLKPIVKKGKHRKKNNIDDIEEELKKFEIKEEEPEEQEDKLEEKTEKKLSHK
EKKKLKKQQEYEKQMELLTKKGGQGHSELDANFTVSQAQKTAGQMAALENAVDIKVENFS
ISAKGQDLFVNATLLIANGRRYGLVGPNGHGKTTLLRHLAQRAFPLPPHIDILLCEQEVT
ASDMSAVDTLLESDVKRTELLKECKELEADIENGDLKKQDRLNEVYAELKAIGADSAEPR
ARRILAGLGFSREMQDRATKNFSGGWRMRVSLARNGNNKIKNVLEFLCDKCNKNTFNLLL
QKKISHQVLYFYNEQTQKIVFFPTYLVDPIVNLYSSTRHVTTYCVTLNSPFIVYLILETH
PHEMLSLSLAGEKKQKDALTRKQEKNRSKSQREEAEDGAAPVTLLQRPKDYLVKFSFPDP
PPLQPPILGLHNVDFFFPGQKPLFREVDFGIDLNSRIAIVGPNGVGKSTFLKLLVGELSP
IRGDLIRNHRLRIGRFDQHSGEHLTAEESPVEYLQRLFGLQYEKARKALGTFGLQSHAHT
IKMKDLSGGQKARVALAELTLMAPDVIILDEPTNNLDIESIDALAEAINAYKGGVVIVSH
DERLIRETDCALYVIEDQTINEVDGDFDDYRKELLESLGETVNSPSIIANAAVQQ