New model in OGS2.0 | DPOGS204067  |
---|---|
Genomic Position | scaffold3996:- 10609-12642 |
See gene structure | |
CDS Length | 1131 |
Paired RNAseq reads   | 198 |
Single RNAseq reads   | 530 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010807 (1e-109) |
Best Drosophila hit   | CG12395 (4e-15) |
Best Human hit | sperm flagellar protein 1 (2e-22) |
Best NR hit (blastp)   | PREDICTED: similar to calponin-homology and microtubule-associated protein [Tribolium castaneum] (6e-34) |
Best NR hit (blastx)   | PREDICTED: similar to calponin-homology and microtubule-associated protein [Tribolium castaneum] (9e-28) |
GeneOntology terms    | GO:0019861 flagellum GO:0042995 cell projection GO:0005929 cilium GO:0003674 molecular_function GO:0008150 biological_process GO:0009434 microtubule-based flagellum GO:0005737 cytoplasm |
InterPro families    | IPR010441 Protein of unknown function DUF1042 IPR001715 Calponin homology domain |
Orthology group | MCL12653 |
Nucleotide sequence:
ATGTCTGCCTACGATTCACCGATACCACTGTCTGATATTGAGACCGTCCTGGCCTGGGTC
GACACATTCAAGCTGTCAAGGCCTACGAAGAAAATAAACAGAGATTTCTCTGATGCTGTA
CTTCTAGCGGAAATCTTAAGCGTGCATTATCCTAAGCTGGTGGAGATGCACAACTACCCG
CCCAGGAATAGTCATTCCCTTAAATTGAACAATTGGATGACTCTGAACAGGAAGGTGCTT
AAGAAGCTGCGTCTGAACCTGTGCAGCAACACCATGGAACAGCTCGCGAACTGCGCTCCT
GGGGTCATCGAACGTGTTCTGGTTATGGTCCGAGACAAGATCCGTCGAGATGAGGACGCT
AATAGGTCGCTGAAAGAGTCTGAACAAAATGTTTCCAGTGGCGGAAGTTACTACGAGGCC
TGCGGAGACGAGGAACATGTATTGGTAGTTCCTGTTAAGATGAGAGTGAATGGAGTTTTA
GAAACAATCCAGCAGAAAGTTGTCAACTACGAAACACATCTAACACTTAAAGAAGAACTG
AAAGATGCAAAGGAAACTGTGGAAACGCTGAAACAAAAGGTCGAACACTTGGACAAGTTG
CTGAATCTTAAAGAGGAGAGAATAGAAGAATTGCAGAAACAGTTAGAGCGGAAACAGACA
AAGCGTAAAGAGGTTGAGGCCCTTCAGAATAGTTTAGCTGTGCCCTTTGAACCTGAACCG
CCAACACCCAAAATTTTTGATCTGATACCTGTACCCAGCAGGACGGTTTCAGCGAAATCT
TTAGAATCTTCCAGTAAAGTGTCCATCGAATCTAACAAATTACCAAATCAAGAACTCGAA
GGGATATCCAAGGAAGAAACTAAAATTCCCATACCAAAACTCGTCATCCCTAAATGCAAA
TCCAAACCGAGTGTTACAGAAGTGCTTGATTTCAAGCATCAGAATTCCGAGGAAAAAATT
GATGTGGACAGAATCAAATCCGACGTATTCAAGGAAATCGAAATAACTGATGATAATAAT
AATGATATGAGGATGCCCTCGAGTGTCCAGGAATTTATCACAATAGAAAATAGCATCAGG
CAGGAGGTTCAGGAGATATGTGATGCGGTACATTTACGTGACACGACTTAA
Protein sequence:
MSAYDSPIPLSDIETVLAWVDTFKLSRPTKKINRDFSDAVLLAEILSVHYPKLVEMHNYP
PRNSHSLKLNNWMTLNRKVLKKLRLNLCSNTMEQLANCAPGVIERVLVMVRDKIRRDEDA
NRSLKESEQNVSSGGSYYEACGDEEHVLVVPVKMRVNGVLETIQQKVVNYETHLTLKEEL
KDAKETVETLKQKVEHLDKLLNLKEERIEELQKQLERKQTKRKEVEALQNSLAVPFEPEP
PTPKIFDLIPVPSRTVSAKSLESSSKVSIESNKLPNQELEGISKEETKIPIPKLVIPKCK
SKPSVTEVLDFKHQNSEEKIDVDRIKSDVFKEIEITDDNNNDMRMPSSVQEFITIENSIR
QEVQEICDAVHLRDTT