New model in OGS2.0 | DPOGS215518  |
---|---|
Genomic Position | scaffold4591:+ 7180-12849 |
See gene structure | |
CDS Length | 1119 |
Paired RNAseq reads   | 760 |
Single RNAseq reads   | 1766 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014058 (2e-162) |
Best Drosophila hit   | CG10646 (5e-77) |
Best Human hit | protein TSSC1 (1e-70) |
Best NR hit (blastp)   | PREDICTED: similar to tumor suppressing subtransferable candidate 1 [Apis mellifera] (5e-87) |
Best NR hit (blastx)   | PREDICTED: similar to TSSC1 [Tribolium castaneum] (3e-88) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
InterPro families    | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
Orthology group | MCL13578 |
Nucleotide sequence:
ATGGAAGGAGGTAATTCCATTATATACGGACTTGAGCACCAGACTAGAGCTCTGTCACCT
CAATATGGTGAGAGTGACGCGATAAGATTCCTCATAGGAACTCAAAGCCTTAAACCAAAC
AGTAACCAAGTTCATGTAGTTGAGCTTGAAGAAGACACAGGTGAACTACATACCAAGGTA
TTTAAACATGACATTGGCGAAATATGGCACCTCCGCTGTTCCCCTCACGACGCGGCTACC
CTCATAACAACACACAATTCATACAACTCGGATACAAGTCAATGTTCCATGGGCGTGTCC
ATATTTAGGCTCCCTACCACTGAGGTTATTCCAAAGGATTTAGACGCCATGACCATACTG
AATAATAGGAACGCTGAAGATATGGAACTCCTCAAAACGATGACTCCAGAGAAACCGGAA
GAGGAAATACGCTGTGCTGAATGGCATCCCATGGATATGAACCGGATTGGTATAGTATTG
GACAATTACGTCAGCATTAGGGACACCAACACGGGAGAACAAGTGGGCCGAGTGGCACCG
GAGGGCAGGAGTAGGCTTAAATTTAGCGGAGGAAAGTGGAGTCCACAAGTACAAAACCAG
TTCGCAGTGCTCCAAGACACGCATATAAAATGCTTCGATACACGGACCGACTGTTCCAAG
GCCGCTTGGAACATTGACGGCGCACACAGACAGCTGGCCAGAGACCTAGACTTTAATCCT
AATAGACAGTTCCATTTGGCGAGCGCCGGTGATGACGCAGCATTGAACATTTGGGACTAT
AGGAACGGGAAGGAACCGATATTCACTAGGACTGACCATTCTCATTGGGTGTGGACAGTC
CGTTACAACACATACCATGAACAGCTTTTATTGACCGGAAGTTCAGACGCCCGCGCCCTC
CTCACGTCCGCGGCGGGCGTGTGTGACGATGAAGAGGGTCTCAGGATTAGCCAGGTGCTA
GAAGATGGCGTCTTACAATCCTACGAACAACACGAGGACTCGGTGTATTGTGCTGAGTGG
AGCGCCGCGGAGCCCTGGAGCTTCGCCTCACTCAGCTACGACGCCAGGCTCGTTATATCA
AGAGTGCCCTTACATTTTAAATATAAGATACTGTTGTAA
Protein sequence:
MEGGNSIIYGLEHQTRALSPQYGESDAIRFLIGTQSLKPNSNQVHVVELEEDTGELHTKV
FKHDIGEIWHLRCSPHDAATLITTHNSYNSDTSQCSMGVSIFRLPTTEVIPKDLDAMTIL
NNRNAEDMELLKTMTPEKPEEEIRCAEWHPMDMNRIGIVLDNYVSIRDTNTGEQVGRVAP
EGRSRLKFSGGKWSPQVQNQFAVLQDTHIKCFDTRTDCSKAAWNIDGAHRQLARDLDFNP
NRQFHLASAGDDAALNIWDYRNGKEPIFTRTDHSHWVWTVRYNTYHEQLLLTGSSDARAL
LTSAAGVCDDEEGLRISQVLEDGVLQSYEQHEDSVYCAEWSAAEPWSFASLSYDARLVIS
RVPLHFKYKILL