New model in OGS2.0 | DPOGS210910  |
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Genomic Position | scaffold8106:+ 899-4519 |
See gene structure | |
CDS Length | 1080 |
Paired RNAseq reads   | 69 |
Single RNAseq reads   | 458 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003093 (1e-87) |
Best Drosophila hit   | spire, isoform C (2e-47) |
Best Human hit | protein spire homolog 1 isoform a (1e-12) |
Best NR hit (blastp)   | spire, putative [Pediculus humanus corporis] (7e-63) |
Best NR hit (blastx)   | spire, putative [Pediculus humanus corporis] (5e-58) |
GeneOntology terms    | GO:0007316 pole plasm RNA localization GO:0007315 pole plasm assembly GO:0007304 chorion-containing eggshell formation GO:0048477 oogenesis GO:0030036 actin cytoskeleton organization GO:0003779 actin binding GO:0045451 pole plasm oskar mRNA localization GO:0008270 zinc ion binding GO:0016192 vesicle-mediated transport GO:0030717 karyosome formation GO:0045010 actin nucleation GO:0005737 cytoplasm GO:0008017 microtubule binding GO:0030029 actin filament-based process GO:0005938 cell cortex GO:0005515 protein binding |
InterPro families   | IPR011011 Zinc finger, FYVE/PHD-type |
Orthology group | MCL10342 |
Nucleotide sequence:
ATGACGAAGACGAAGACGACACAGAGACTTGTGTCAGTCCTGAAACCTGCCCGCCCCAGC
CCTTCCCGAGGCACACCATCAAACAGACACCGCCGAAACCATGGAAGAGAACCGGTTGGT
ATCACCAGTTATATTACCTATCGATTGACTGAGCCAGCACGCTGCTTGTTACAAACAGGA
AAGAATAATGAATGGTGGTCGGCTTCGTTCACAAGCGCCGAGCTAGCTTCAGCGGAACAC
AAAACTCTGTCTATAAATCCAATGTCCGTGGATACGCCGCGGGCTCCTCCCCGCGCGCGC
ATCTCACACGACGAGTACCATCAGTTTTTCGACGAGACCCTCGAATCCTACGACCTGGCT
ACCCAATGTCCCTCCCGGCGAGCGTCCATGCGTCGCCACACAATAACACACGCACACGCG
TGCCCCGCGACCGACGGCGCACAGTCACTGCCACATTCGAGACCGGGTTCTCGTGCGTCC
TGCGCAGGGGCGTCTCTCAGCAGTGACGACGCTCAGCTGAATGAGTTGTCGTGGTCCCGA
GCCTCGCTCCAGGACGAGCTGATCAAGTCGGTTAGTGACAGCCCTACCAGCACGCATAAG
CAATGGCAGGACGCAATTATATCAGACGAGCGTCTCTCGCTAACGCTAGAGGAGATCGTC
CACATCAGATCTGTGCTGACGAAGGCTGAGCTAGAGGTTCTGCCGGTGGAGGGCAGGGTC
AAAGAAGACGTGGAGAGACGACGGGTTTGTTTCCTGTGCCTGAAGACGAGGTTTGGCATC
TTCGGTCCTTGGGGTCAGAAATGCAAACTGTGCAAGAAGACCGTCTGTCAGAAATGTTGT
TCCAAGATGCGTATCCCGACGGAACACTTCGCGCACGTCCCCGTTGCGTTGTTGTCGCCG
TCCTTGCTCCCCTCCCCCGACGAGGAGACCGCCTTCCCCCGCTCGCTGATGGCGCGGCTC
GTGTTGCCCGAACACGCGGTGAGTCACCAGCGGACAGTTAACGTAGGACACGTGGTTATA
CCAACTTATATATTCATCACATACAAAATGTCTATTCACTTGGATGTGGTGGAAATTTAA
Protein sequence:
MTKTKTTQRLVSVLKPARPSPSRGTPSNRHRRNHGREPVGITSYITYRLTEPARCLLQTG
KNNEWWSASFTSAELASAEHKTLSINPMSVDTPRAPPRARISHDEYHQFFDETLESYDLA
TQCPSRRASMRRHTITHAHACPATDGAQSLPHSRPGSRASCAGASLSSDDAQLNELSWSR
ASLQDELIKSVSDSPTSTHKQWQDAIISDERLSLTLEEIVHIRSVLTKAELEVLPVEGRV
KEDVERRRVCFLCLKTRFGIFGPWGQKCKLCKKTVCQKCCSKMRIPTEHFAHVPVALLSP
SLLPSPDEETAFPRSLMARLVLPEHAVSHQRTVNVGHVVIPTYIFITYKMSIHLDVVEI