| New model in OGS2.0 | DPOGS201109 |
|---|---|
| Genomic Position | scaffold9826:- 10756-11550 |
| See gene structure | |
| CDS Length | 795 |
| Paired RNAseq reads | 148 |
| Single RNAseq reads | 583 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013676 (5e-51) |
| Best Drosophila hit | CG3165 (4e-15) |
| Best Human hit | three prime repair exonuclease 2 (1e-12) |
| Best NR hit (blastp) | PREDICTED: similar to three prime repair exonuclease 1 [Tribolium castaneum] (5e-35) |
| Best NR hit (blastx) | PREDICTED: similar to three prime repair exonuclease 1 [Tribolium castaneum] (2e-30) |
| GeneOntology terms | GO:0003676 nucleic acid binding |
| InterPro families | IPR012337 Ribonuclease H-like IPR006055 Exonuclease |
| Orthology group | MCL11141 |
Nucleotide sequence:
ATGCCTGTTCAAGAAAATAACAAGACGAGGATAACTGAAATAAGTCTAGTTGCTGTAAAA
CGTGAACATTTACTCGACACTCGTCCCGGTTATTCTCCTCGAGTTCAGCAGAGAATTACA
CTTTGTCTAAACCCTGGAAAATACATAGATCCTGGCGCAACGAAAGTCTCTGGCCTCTGC
AATGATCTCCTGGAATACGAACCCACCTTCAATCAAAATCTCTTCAATACCCTCAACTCG
TTTATCAACCTTCTAAAGAAACCTATTTGTTTGATTGCGCAGAATGGACTTAATTTTGAC
TTCCCAATATTAAGAAATCATTTGGAAAAACTTGGTGTTAGTTTTGCCAAAGATATTAAA
TGTGCCGATTGCTTTTATGCATTTTACCACATTATGGAAGGAAAAGACTCAACCCCAAAA
CTTGAAGACATAGATCATGAGTCTGACAATTCACAGAACATACAATCCACTAATGAAAGC
TCTCCTACATCATCACCTACCAAAGTGTGCCCTGAGACTCCAATTAAAAGAGGTATTAAC
CGATCAAGAGTCCGAAGGCGATTTCCATGGTCGGATGGGAACAGGCCGAAAGATAAATAT
AAATTGAAATATATATATGAGAGACTGTTGAATCGGACAGCGGTAAACCCTCATCGTGCT
GAAAATGACTGTTTGTTAGCTCTGGAATGTGCTGCAGCTTTGTCAAAACAATTTGTGAAG
TGGGTCGACCAAAACAATTGTTTGTTCAGTCGTATACATCCTATGACTGTCGGTGTGCCA
CTGCATCAAGCATAA
Protein sequence:
MPVQENNKTRITEISLVAVKREHLLDTRPGYSPRVQQRITLCLNPGKYIDPGATKVSGLC
NDLLEYEPTFNQNLFNTLNSFINLLKKPICLIAQNGLNFDFPILRNHLEKLGVSFAKDIK
CADCFYAFYHIMEGKDSTPKLEDIDHESDNSQNIQSTNESSPTSSPTKVCPETPIKRGIN
RSRVRRRFPWSDGNRPKDKYKLKYIYERLLNRTAVNPHRAENDCLLALECAAALSKQFVK
WVDQNNCLFSRIHPMTVGVPLHQA