| New model in OGS2.0 | DPOGS200703 |
|---|---|
| Genomic Position | scaffold4124:+ 7794-14596 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 599 |
| Single RNAseq reads | 1615 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005238 (0.0) |
| Best Drosophila hit | F box and leucine-rich-repeat gene 4 (4e-66) |
| Best Human hit | F-box/LRR-repeat protein 4 (2e-58) |
| Best NR hit (blastp) | fbxl4, putative [Pediculus humanus corporis] (6e-99) |
| Best NR hit (blastx) | fbxl4, putative [Pediculus humanus corporis] (3e-101) |
| GeneOntology terms | GO:0016059 deactivation of rhodopsin mediated signaling |
| InterPro families | IPR001810 F-box domain, cyclin-like IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL11412 |
Nucleotide sequence:
ATGCAGAGTGCCTCCGATATTATTTCTTCCTTGTTATGGTTCAAAGACGATTCATATTCA
AATGAAGAAAACGATTCTCAAATAATCGAGCAGTTTGTTCAAACTGTGGAAGATTTTAGC
TCTCAGTATGGAAGCGAAATTAGTGTATCATATACCGCTTTTAATTTAAGAGGCCCCCCG
TCTAACTTTCCAGATTATGGAGATTATCCGCAAGCCTTTGTTATGCGGACTTATGGAACT
TGGTGGGATGAAGCACCATCATTTCAAAAGGATTACATGCCCCAAAACAGTAGTGCAATA
CCAAGTCAGGATTTTGTGGAAGTGTCATTTGAAAGGGCAGTGTTTCCGTTGGAGGTGGCA
GTATTTGAGACATACAATCCCGGTGCTTTAGTTAGAATTTGGGCACTCGGACGTGCTTCA
TGGATTCTGTTGTGGGAAGGGGAGCCAGAATATGCAGGTGATACTCCAAGGATATTCAGC
CCACCAATACGACAAATAAATGTTCCAACAAGGATACTGAGATTAGAATTCAATCACCGT
CTCCTGCCGTACTATACAGAACTTGACGCCGTTCTGCTGAGGGGAAGAGAACCCGCAAAT
ATTGGAAAAATAAAAAATAATTTTTCATATTCCACTCTATTCAAGAGGAGCCAGCCGGTT
GTTGAGAAAGGTATGCTTCTTAATAAAGTAATTGCTTCAAATCTCCACGAAGACATAGTG
CAGCCGACGGTTTTGTCCTCAGATAAATTGTTAGATAGAGGGCCACCATTAGGCGATTTT
CAGAGACTCCCTGACGAGACTATATTATCGGTGATGAAATATTTAGATATGCAGTCTTTA
TGTAGATGTGCTCAGGTCAATACACATTTCAAAAGGCTGGCATCTGATGCCATATTGTAT
AGAAGTATTGATCTCCGACCATACTGGCATTGTGTGAGATCTCAGGTGCTTGTCAATCTA
TCAATGAAATGCAAATTCCTACAGAAACTTGATCTGTCATGGTGCGGCAGTCATTGCATG
ATACAGTCCTATTATGTTGTTAATTTCTTAAAATACAGCGGCTCTGAATTAACACATCTA
AGGATGAATTGCTGTAAATTTGTTGACAACACTGTACTAAGAGCTATTGTTGACACTTCA
TTTAATTTACAAGAGCTATGTCTGCGGTCGGTGGTCACGTGTTCTGAATGGTCGTGTTTA
TCTTCACTCACCAAGTTAAGGCGACTTGATCTATACAGAACTCACATAACTACATCGGCT
GCTGTCTCCATTGTTTGGTCAAATCCATCGCTAGAGCACCTCAATGTTGGTATGTTATCT
CGTACAATTTCTTTGTAA
Protein sequence:
MQSASDIISSLLWFKDDSYSNEENDSQIIEQFVQTVEDFSSQYGSEISVSYTAFNLRGPP
SNFPDYGDYPQAFVMRTYGTWWDEAPSFQKDYMPQNSSAIPSQDFVEVSFERAVFPLEVA
VFETYNPGALVRIWALGRASWILLWEGEPEYAGDTPRIFSPPIRQINVPTRILRLEFNHR
LLPYYTELDAVLLRGREPANIGKIKNNFSYSTLFKRSQPVVEKGMLLNKVIASNLHEDIV
QPTVLSSDKLLDRGPPLGDFQRLPDETILSVMKYLDMQSLCRCAQVNTHFKRLASDAILY
RSIDLRPYWHCVRSQVLVNLSMKCKFLQKLDLSWCGSHCMIQSYYVVNFLKYSGSELTHL
RMNCCKFVDNTVLRAIVDTSFNLQELCLRSVVTCSEWSCLSSLTKLRRLDLYRTHITTSA
AVSIVWSNPSLEHLNVGMLSRTISL