| New model in OGS2.0 | DPOGS202508 |
|---|---|
| Genomic Position | scaffold563:- 90499-93446 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 238 |
| Single RNAseq reads | 798 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001427 (0.0) |
| Best Drosophila hit | abnormal oocyte (8e-40) |
| Best Human hit | DET1 homolog isoform 1 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to de-etiolated homolog 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to de-etiolated homolog 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
| InterPro families | IPR019138 De-etiolated protein 1, Det1 |
| Orthology group | MCL14983 |
Nucleotide sequence:
ATGAGATTAATGGACAGGGAAATTTACGGATCTCGCAAACCGGGTTCTCATTTTCATGTC
GTCAGAGAATTTTATCAAAATGTTTTTCCTAACTTGACTATTGTCAATGTGGAGAAACCC
CCGTGTTTTTTGAGAAAATTTAGTCCAGACGGAAAGCATTTTATTGCTTTCTCTGCTGAT
CAGACATCCTTGGAGATATATGAATACAGAGGAGCCTCTGCCGCAGGAGACCTAGTGGCT
GGATATCCTTCAGATTTACTTAATGCTGATGCTGATGCACACCATAGAATAAGAACACAT
ATATTTTACAGATTCTTTAAGCCTAAATTTACTGTAAATGTTTGCCAACAAAGGCTACCC
TCCAGATCTGAACGTAACTCCGGCCAGCATCCTTTTATGGATCAGCAACTCAACAGGGAA
TGCAGTCTTTTTACAGAGGATGGGAGATATGTTATAGTTGGTTCAGCGGCACACATCCCT
GATGATCTGAGACCTCATTTCTATCACATACACAGTAACAATGAAGCAGTGACACCAACT
ATTAGATCTGCCCTAGAAGACTACTCTCTGCATTTGGTAGATTTACATCATGGGAAGCTT
TGCGATACAAAACACTTCAGAACTGACAAAATATACCTGTCTCATAATCAAGGAATTTAT
TTATATAAAGAAGTTTTAGCTGTACTCTCTGTGCAGCATCAAACGATACACTTGTTCCAG
ATTGTTGAGGGTATGTTGATAGAAATACGAAAAATTGGTAGATTCTGCTACGATGATGAT
CCGTTCATTGTCAGCTCAGTGTTTGCGCCAATAACAAATGAAAGGCCCTTCCATGAAGAG
ACAATTAACAGTTTGAAGCATAGACTACTTGTGTTCCTATTTAAAAGAGCTAAATCTATA
AGTGACAATACAAAGGATCCATTGGAATTGAGGAAATTTTATAAATATTTTGACATGTTT
AAAAGTTTGAGGATGTGGAAGATGCAGCTATTGGATGAAGATCACCTTTTCATTAAGTAC
GCAAGCGAAGAGGTTGTTACATTAAGAGTGGCTGAACCGAATAGCCAGTCATCGTTCTTT
GTGATATATAACATAAGCGAAAGTAAAATATTGGAAGTATACGAAAATACATCCGAAGGT
CTGCTGAAGCTGTTTGAGAATTATTGTGATTGCTTCAGAAACGCGAGACTGTGTGCCGAT
TCACAGTTTACGTGCTCGCCGTCGAATAATCTGTACGCGAGGTTGACTCAGCAACGTTTC
AAACAAACTATTGTTCGAGCCATCTATGGTGGCAGAACTGAAGCAACTAAAAGGATACTA
GCTCAGTTACCGATCAGTGCACAGTCGTATAGTGGATCGCCATATCTAGATCTTGGACTT
TTTAGTTATGACGATAAATGGGTATCAGTTATGGAACGCCCAAAAGCCTACGGCGAATAT
CCCATACGTTTCTACGCCCGTGACTCAGGTTTGCTTAAGTTCAAGATATATGCTGGTGTG
TTGGGTCAGTCGGTGCCGGCCAGTGCTCGCCGCCTCGTCGCCTTCACCTTCCACCCAACA
GACCCGTTCGCTATCAGTGTTCAGAGAACTAATTCCGAGTATATTGTCAATTTTCATATC
AGGAACGCGGTGTTCAGCTGA
Protein sequence:
MRLMDREIYGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFSPDGKHFIAFSAD
QTSLEIYEYRGASAAGDLVAGYPSDLLNADADAHHRIRTHIFYRFFKPKFTVNVCQQRLP
SRSERNSGQHPFMDQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYHIHSNNEAVTPT
IRSALEDYSLHLVDLHHGKLCDTKHFRTDKIYLSHNQGIYLYKEVLAVLSVQHQTIHLFQ
IVEGMLIEIRKIGRFCYDDDPFIVSSVFAPITNERPFHEETINSLKHRLLVFLFKRAKSI
SDNTKDPLELRKFYKYFDMFKSLRMWKMQLLDEDHLFIKYASEEVVTLRVAEPNSQSSFF
VIYNISESKILEVYENTSEGLLKLFENYCDCFRNARLCADSQFTCSPSNNLYARLTQQRF
KQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFSYDDKWVSVMERPKAYGEY
PIRFYARDSGLLKFKIYAGVLGQSVPASARRLVAFTFHPTDPFAISVQRTNSEYIVNFHI
RNAVFS