| New model in OGS2.0 | DPOGS202527 |
|---|---|
| Genomic Position | scaffold563:+ 106210-111475 |
| See gene structure | |
| CDS Length | 1539 |
| Paired RNAseq reads | 3133 |
| Single RNAseq reads | 8435 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001551 (0.0) |
| Best Drosophila hit | ubiquilin (5e-122) |
| Best Human hit | ubiquilin-1 isoform 1 (1e-111) |
| Best NR hit (blastp) | ubiquilin 1,2 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | ubiquilin 1,2 [Aedes aegypti] (2e-162) |
| GeneOntology terms | GO:0042982 amyloid precursor protein metabolic process |
| InterPro families | IPR000626 Ubiquitin IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal IPR009060 UBA-like IPR006636 Heat shock chaperonin-binding IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote IPR015496 Ubiquilin IPR019955 Ubiquitin supergroup |
| Orthology group | MCL12413 |
Nucleotide sequence:
ATGGCAGAAGGCCAGGAGGAACCTAAAAAGATTACAATTACTGTAAAAACACCAAAAGAA
AAGCAGCAAGTTGAAATCGAAGAAGATGCAGATATCAAAAAACTCAAAGAAGTGTTGTCC
CCTAAATTTAACGCGGAGCCCGAACAGCTATGTTTAATTTTTGCCGGAAAAATTATGAAC
GATTCAGATACTATGAAGCAACATAACATCAAAGATGGGTTGACAGTTCATCTTGTTATC
AAGACTCCTCCAAGACCTGAACCGGAAGGTGGAACACGGCGCCCTCCAGCTGATATTGGT
GCTACACCTTTTGGACTGAACTCTCTTGGGGGTCTAGCAGGCTTAGAAAGCCTTGGTCTA
GGCCAAAGCACTTTTATGGACCTGCAAGCTCGTATGCAACAAGAGCTTTTGTCGAACCCT
GATATGTTACGACAAGTGCTGGATAACCCACTCGTTCAGCAAATGATGAACGATCCTGAG
AATATGCGAACCCTTATTACATCCAACCCGCAGATGCAAGATTTGATGGCTAGGAACCCT
GAAATTAGTCATATGTTGAACAACCCTGAACTGTTACGACAAACAATGGAATTGGCACGC
AATCCTGCCATGCTTCAAGAGTTGATGAGGTCCCATGACCGAGCTTTGTCCAACTTGGAG
AGTATACCTGGTGGTTACAATGCTTTGCAGCGAATGTATCGAGACATCCAAGAACCAATG
TTGAATGTAGCCAGTAGCATGGCTGGAAATCCATTCTCTGGACTAGTAGACAATTCAGAT
GGCACCAATCCCCAACAGGGGGCAGAGAACCGTCAGCCCCTTCCAAACCCTTGGCAGCGT
GGAGGTTCTAATGCATCTAGCACACCAAACACAGGCCCAGGCCTTATCAATACACCTGGC
ATGCAGTCATTGCTACAACAGATGTCTGAAAATCCTCGTCTTGTACAATCAATGCTATCA
GCACCATACACTAATAGTATGCTACAAGCTCTCGCTGCCGACCCGGAGATGGCATCTCAA
CTTATTAACCAGAATCCCATGTTTGCCAATAATCCACAACTGCAAGAACAGATTCGTACT
ATGATGCCACAAATGCTAGCCCAGCTGCAGAATCCAGAAATGCAACAGATGATGTCTAAT
CCACAGGCGCTGAATGCCCTACTTCAGATCCAGCAGGGTATGGAACAATTGCGAGCGGCG
GCACCAAGTCTGGTCAATAATATGGGCTTCGGAGCAGCCGCTGCCACTGCCGCCCCACCC
CCACCTCCCACTACTAACACACCGCCAGCACAAGCGAGACAACAACAGAACTCTGAGCTG
TTCACACAGTTCATGCAAAGAATGGTATCGGCGATGGCCAACAACCAGACCAACACTCAG
CAACCCCCGGAACAACGCTACTCACAACAGCTAGAGCAACTTGCAGCCATGGGTTTCCTC
AACAGGGAGGCTAATTTACAAGCACTGATCGCAACATTTGGTGACGTGAACGCGGCAGTT
GAAAGGCTACTGGCTCTAGGTCAACTGTCCATGAGCTAA
Protein sequence:
MAEGQEEPKKITITVKTPKEKQQVEIEEDADIKKLKEVLSPKFNAEPEQLCLIFAGKIMN
DSDTMKQHNIKDGLTVHLVIKTPPRPEPEGGTRRPPADIGATPFGLNSLGGLAGLESLGL
GQSTFMDLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRTLITSNPQMQDLMARNP
EISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIPGGYNALQRMYRDIQEPM
LNVASSMAGNPFSGLVDNSDGTNPQQGAENRQPLPNPWQRGGSNASSTPNTGPGLINTPG
MQSLLQQMSENPRLVQSMLSAPYTNSMLQALAADPEMASQLINQNPMFANNPQLQEQIRT
MMPQMLAQLQNPEMQQMMSNPQALNALLQIQQGMEQLRAAAPSLVNNMGFGAAAATAAPP
PPPTTNTPPAQARQQQNSELFTQFMQRMVSAMANNQTNTQQPPEQRYSQQLEQLAAMGFL
NREANLQALIATFGDVNAAVERLLALGQLSMS