| New model in OGS2.0 | DPOGS212336 |
|---|---|
| Genomic Position | scaffold101:- 365616-373753 |
| See gene structure | |
| CDS Length | 1107 |
| Paired RNAseq reads | 119 |
| Single RNAseq reads | 434 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009688 (7e-17) |
| Best Drosophila hit | knirps-like (5e-49) |
| Best Human hit | nuclear receptor ROR-beta (8e-16) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC003413 [Tribolium castaneum] (9e-68) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL011231 [Aedes aegypti] (7e-57) |
| GeneOntology terms | GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0007427 epithelial cell migration, open tracheal system GO:0035151 regulation of tube size, open tracheal system GO:0046845 branched duct epithelial cell fate determination, open tracheal system GO:0007088 regulation of mitosis GO:0007424 open tracheal system development GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR013088 Zinc finger, NHR/GATA-type IPR008946 Nuclear hormone receptor, ligand-binding |
| Orthology group | MCL17369 |
Nucleotide sequence:
ATGAATCAGAAGTGCAAAGTCTGTGGAGAACCGGCTGCCGGCTTTCATTTCGGAGCTTTC
ACCTGCGAGGGATGCAAGTCATTCTTCGGACGCTCCTACAATAATCTCAACTCCATTACG
GAATGCAAAAACAACGGCGAGTGTGTTATCAACAAGAAGAATAGGACTGCATGTAAAGCT
TGCCGACTTCGAAAATGTTTGATGGTGGGCATGTCAAAGTCTGGTTCCAGATACGGAAGA
CGTTCCAATTGGTTTAAGATTCACTGTCTTCTTCAAGAACAACAGCAAGCAGCTCAATCA
CAGTCACCCCCTAGAATGCCACAATCGCCGCACATGGCGCCTCCCTTTCCACCTCATCTG
TTCCCTGGACTAGCGAGACCACGGTCAAAAGAAGAACTCGCTCTTTTGAGCCTCGATGAT
TACAAGATGCCCTGCTCTGGATCCCCAGATTCCCACCGAAGCGGGTCCTCACCTAAATTA
GATGAGAAATCTAGGCTCACACAATCCCGGCCGCCTGACAGACCTCTGACACCGCCCAGA
GACGCTTTTCTCCATCTTCCTCTAGCCAATATATCCTTGCCACACTTCCCGCATTCGCCG
TTTCTACCGCCACACCATTTCAATACATTCCCTCCGAACCATCCACTATTATTTCCACCT
GGTTTCCATCCGATTTATTCTAGACATTTACTGGATCATGCGGCACTCAGACAGGCCGCT
GAAAACAACAATGATGTCAGAATCGACGATAACAACACAGACTCGTCGAAGCGATTCTTT
TTGGACGAGATATTAAAGCAACAGAGATCCAACCAGCCCGCACAAGAAGATGTCATATCG
GAGGCTGAGTTCGTGCCAACACCTCCGGCGGAAAGAAGGACGTCAGAATCACCGTTACAG
GAAAACCCGATGGATCTGTCGGTGAAATCCGACGGTAGATCGAGTTCAGCGAGACGAAGG
TCCGATGATAGCGAGATAATCACCCCAGACAATGATGACCCGGAGAGTGGCAGTGATCGA
GCATCGGCCAGTGACGAAGAGGACATGGCATACTCTCAAATAAAGAGGATCAAACTCCAT
CCTCTCGACCTGACGACTAAAGTCTGA
Protein sequence:
MNQKCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSITECKNNGECVINKKNRTACKA
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAAQSQSPPRMPQSPHMAPPFPPHL
FPGLARPRSKEELALLSLDDYKMPCSGSPDSHRSGSSPKLDEKSRLTQSRPPDRPLTPPR
DAFLHLPLANISLPHFPHSPFLPPHHFNTFPPNHPLLFPPGFHPIYSRHLLDHAALRQAA
ENNNDVRIDDNNTDSSKRFFLDEILKQQRSNQPAQEDVISEAEFVPTPPAERRTSESPLQ
ENPMDLSVKSDGRSSSARRRSDDSEIITPDNDDPESGSDRASASDEEDMAYSQIKRIKLH
PLDLTTKV