| New model in OGS2.0 | DPOGS212345 |
|---|---|
| Genomic Position | scaffold101:- 129733-132466 |
| See gene structure | |
| CDS Length | 1392 |
| Paired RNAseq reads | 110 |
| Single RNAseq reads | 788 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004663 (7e-137) |
| Best Drosophila hit | CG7102 (4e-109) |
| Best Human hit | small nuclear ribonucleoprotein E (7e-37) |
| Best NR hit (blastp) | GH11553 [Drosophila grimshawi] (4e-117) |
| Best NR hit (blastx) | GH11553 [Drosophila grimshawi] (3e-111) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR011705 BTB/Kelch-associated IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR006571 TLDc |
| Orthology group | MCL13958 |
Nucleotide sequence:
ATGGCATACAAAGGCCCACCTAAGGTACAGAAGGTTATGGTACAACCCATTAACCTTATC
TTCAGATATTTACAAAACAGAAGCCGTGTACAAATATGGCTTTACGAGAATGTGAATTTG
AGAATCGAGGGTCACATTGTTGGTTTCGATGAATACATGAATATTGTTTTGGACGAAGCT
GAAGAAGTTCACATGAAAACCAAAAATCGCAAGCAAATTGGAAGAATTATGATGAAAGGA
GATAACATAACGCTTATACAAAATGTAAACCCGAACGCTACATTTAGTGAAATACATGGA
ACACTTGAGTTTGAGATCTTTGATTCAAAGAAATGTATGAAGCGAGCCCACAAGACAGGA
ATTCATTCCAGTGTAACGGCCAGTAGTGGTAAGAGCGCATCGTCTTTCTTAGAGCGCTGC
ATATCATTCATTGGAGACAATGCTGCGGATTGTGTCAAGACTAATGCGTTCCTCAACCTC
CCAAAAGAAGCACTCATCAAACTCATATCTTCAGACTTTCTGTGTCTGGAGGAGGAGGAG
GTGTGGCGTTGTGCTCTGGCGTGGTCCAAGCAGCGGGCCGGCGTGACGCAGCCCGCCGTG
CATTGGACGGGCGAGGAGCGAGCCCGGGTCTGCCAACACCTGGCCCCGCTCATGCAGCAC
GTGCGACTGCTACTCATCGACAGTACGGTGTTCGCGGAGGAGGTGGAACCCACGGGAGCC
GTGCCCATGGAACTGTCCTTGGAGCGCTACCGCCGCGCCGCACTGCACGCCGCACCGCGA
CACGAGCCCGACAAGAGGACGCAGCCTCGGTCGGCCGTGAACATGTTCGTGGGGTCGGTG
ATCCTGCAGCAGGACCGCGGGGGCCTGCAGTCCCTGGTGAACAGCTGGTGTGGGGCGCCG
GGGGGCCGGCGGGCCTGGCGGCTCGTGTTTCGCGCCTCCAGCCACGGCTACTCTGCCGCC
GCCTTCCACACGCACTGTGACGGAGTGGCGCCCGTGTTACTCTTAGTACAGCTGTCCCGG
GGCGAGGTCATAGGCGGCTACAGTACGGCGGGCTGGTCCCCGGGCGGGGCGGGCGGCTAC
GTGTCTTCGGAGCGCGGCCTGCTGTTCTCCCTGAGCGAGCCGCCGGTCCGCTACCCGCTC
CTCAAGAAACCCTTCGCCCTCTGCTACCATCCAGACTGTGGGCCCATATTCGGCGCGGGT
GCGGACCTGCTGATCTCCAACAACTGTAACATGAACAGTGACAGCTACAGTAACCTCCAC
TCGTACGGGGACGGCTCGCTAGGGTCACTGGGATCCCTGGGGTCTCCGGGGCCCCAGCCC
GCGCCCTCCTCGCTCGCATCTGAGTACAACTTCACCGTCCGTGACTACGAGATCTTCACG
CTCGACCACTAA
Protein sequence:
MAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA
EEVHMKTKNRKQIGRIMMKGDNITLIQNVNPNATFSEIHGTLEFEIFDSKKCMKRAHKTG
IHSSVTASSGKSASSFLERCISFIGDNAADCVKTNAFLNLPKEALIKLISSDFLCLEEEE
VWRCALAWSKQRAGVTQPAVHWTGEERARVCQHLAPLMQHVRLLLIDSTVFAEEVEPTGA
VPMELSLERYRRAALHAAPRHEPDKRTQPRSAVNMFVGSVILQQDRGGLQSLVNSWCGAP
GGRRAWRLVFRASSHGYSAAAFHTHCDGVAPVLLLVQLSRGEVIGGYSTAGWSPGGAGGY
VSSERGLLFSLSEPPVRYPLLKKPFALCYHPDCGPIFGAGADLLISNNCNMNSDSYSNLH
SYGDGSLGSLGSLGSPGPQPAPSSLASEYNFTVRDYEIFTLDH