| New model in OGS2.0 | DPOGS212352 |
|---|---|
| Genomic Position | scaffold101:- 13274-14945 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 299 |
| Single RNAseq reads | 871 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012008 (2e-121) |
| Best Drosophila hit | CG7441 (4e-67) |
| Best Human hit | tryptophanyl-tRNA synthetase, mitochondrial isoform 1 precursor (5e-57) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (6e-110) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (4e-90) |
| GeneOntology terms | GO:0004830 tryptophan-tRNA ligase activity GO:0006436 tryptophanyl-tRNA aminoacylation GO:0005524 ATP binding GO:0005737 cytoplasm |
| InterPro families | IPR002305 Aminoacyl-tRNA synthetase, class Ib IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002306 Tryptophanyl-tRNA synthetase, class Ib |
| Orthology group | MCL13995 |
Nucleotide sequence:
ATGGCGTTAACATCAGGAAGGCTAGCGTATTCAAAACACTTATGTAAAGTTAATATCCGG
TGCATATCGTTACAGGGCTATAAAGCAAAGGAAACTAGCATCAAAAATTCACCTACAGCA
GGAACGAGTGAGACTTGGAACCGAAGAGTTGTGACTGGGTTGCAACCGACAGGGGCACTG
CATGTGGGCAATTACTTTGCGGCTGTACAGCGTTGCGTAAAGCTTCAGCAGCAGGGCGAT
GATCTTATGATATTTATCGCAGATCTCCATGCCCACACTACACAACAAAATCCAACACAA
ATTCAGAAAAATATATTGGAATTGACAGCATACTTGCTTGCTAGTGGGATTGACCCTGAA
CAAAGCATATTATTCGCACAGTCGGCTGTGCCGCGTCATGCCGAACTTTGCTGGCTTCTA
GCCTGCCTCGCGACCCATGCACGTCTTGCACATCTGCCTCAATTTAAAGAGAAATCTGCT
ACTATGAAGGAGGTGCCAATAGGACTTCTTTTGTATCCAGTACTTCAGGCAGCAGACGTG
CTGGTGTATCGCGGCACGCATGTGCCAGTGGGCACAGACCAACTGCAGCACCTGCAGGTT
GCAGCTCAACTCGTGCGCACCTTCCACCACCGATATGGACGGCTTTTTCCTACGCCCTCC
CCAATCCTACCAGATGATGGAAGTGATCGTCTACGTAGTCTTCGTGATCCCACAAAAAAG
ATGTCCAAATCCGACACGGACCCAAAATCAAGGATACTTCTAAGTGATTCAGATGATGTC
ATCAGATTGAAAATAAGAAAAGCCGTTACCGATTTCAACCCACAAGTAACCTTCGAACCC
GATAGCCGTCCTGGCGTGTCCAATCTCGTGACACTCCACTGTCTGGCAGCCGACAAACTT
CCAGAAGAGGTCGTTCTGGAGGCAGAGGGATTAACTACGGCGCGGTACAAGCAAATGGTA
GCGGACGCACTCGTGGCAGCGATCCGGCCGATCCGTGAACGAGCAAACGAGCTGCTGGCT
CGACCGGGTCTGCTGCGACACGTGCTGCGTCACGGTGCCGCGCGCGCTCGCCGCCGGGCT
GACATCGTCTACGGAGACGTCGCGGAACGTCTCGGGCTCGCCAACGCCACACTCCAAACT
TCTGATGAGTTTAACATTTCAAATCAGATAGTTCTTTTAGGATCCAAATCAAAGAAAGCA
GTCGAACATGGTGCATGA
Protein sequence:
MALTSGRLAYSKHLCKVNIRCISLQGYKAKETSIKNSPTAGTSETWNRRVVTGLQPTGAL
HVGNYFAAVQRCVKLQQQGDDLMIFIADLHAHTTQQNPTQIQKNILELTAYLLASGIDPE
QSILFAQSAVPRHAELCWLLACLATHARLAHLPQFKEKSATMKEVPIGLLLYPVLQAADV
LVYRGTHVPVGTDQLQHLQVAAQLVRTFHHRYGRLFPTPSPILPDDGSDRLRSLRDPTKK
MSKSDTDPKSRILLSDSDDVIRLKIRKAVTDFNPQVTFEPDSRPGVSNLVTLHCLAADKL
PEEVVLEAEGLTTARYKQMVADALVAAIRPIRERANELLARPGLLRHVLRHGAARARRRA
DIVYGDVAERLGLANATLQTSDEFNISNQIVLLGSKSKKAVEHGA