| New model in OGS2.0 | DPOGS212379 |
|---|---|
| Genomic Position | scaffold101:+ 323423-324983 |
| See gene structure | |
| CDS Length | 1119 |
| Paired RNAseq reads | 1535 |
| Single RNAseq reads | 3861 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004645 (0.0) |
| Best Drosophila hit | suppressor of profilin 2, isoform A (7e-143) |
| Best Human hit | actin-related protein 2/3 complex subunit 1A isoform 1 (6e-119) |
| Best NR hit (blastp) | suppressor of profilin 2 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | suppressor of profilin 2 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0007010 cytoskeleton organization GO:0030041 actin filament polymerization GO:0003779 actin binding GO:0005885 Arp2/3 protein complex GO:0007303 cytoplasmic transport, nurse cell to oocyte GO:0008335 female germline ring canal stabilization GO:0007409 axonogenesis GO:0030037 actin filament reorganization involved in cell cycle GO:0008407 bristle morphogenesis GO:0007413 axonal fasciculation GO:0001745 compound eye morphogenesis GO:0030589 pseudocleavage involved in syncytial blastoderm formation GO:0030029 actin filament-based process GO:0005856 cytoskeleton GO:0030833 regulation of actin filament polymerization |
| InterPro families | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR017383 Actin-related protein 2/3 complex, subunit 1 IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL13544 |
Nucleotide sequence:
ATGGCACAAACGCTTACACTAGGTGACTCATGCGCCCCGATAACTTGTCATGCGTGGAAT
AAGGAAAGAAATCAAATCGCTTTTTCTCCCAATAACAATGAAGTGCATATTTACCAAAAG
GAGGGAAATGAATGGAAGCAAACTAATAATCTGGTGGAACATGATATGAGGGTCATGGGA
ATAGACTGGGCTCCGAATACTAACAGGATTGTAACATGCTCTGTGGACCGTAATGCTTAT
GTCTGGACCCAAAGTGAAGATGGGAAGTGGACTACTACCCTGGTATTGTTGCGTATAAAC
AGAGCAGCAACATGTGTTAAATGGTCTCCGATGGAAAACAAATTTGCAGTTGGCTCTGGA
GCTCGCCTGATATCCATTTGCTATTTTGAAAAGGAAAACAATTGGTGGGTGTCTAAACAT
ATTAAAAAACCAATTCGCTCAACTGTAACCACTTTAGATTGGCATCCAAATAATATTCTA
TTGGTTGCTGGCTCGACTGATTTTAAAGTAAGAGTTTTTTCCGCGTATATTAAGGATATT
GAGGATCAACCTGGACCTAATGTCTGGGGGTCTAAGTTGCCTTTAGGTCAATTATTGGCT
GAGTTTCCATCTGCTGGAAATGGATGGGTGCATAGTGTTTCCTTTTCTGCAGATGGCAAC
AAAGTTGCTTGGGTGGGCCATGACAGCTCTATAAATGTAGCCGACGCTTCTAATGGAAGG
GCTGTTATCAAGCATAGGACTGAATATCTACCATTCCTAGGATGCATTTGGATCTCAAAT
AATTCTTTGGTAGTGGCAGGCCATAGCTGCATTCCATTACTCTACTGCCATGACGGAGGG
GAGATTAAGTTTGTTGCAAAGTTGGACAATACTCAGAGGAAAGAGTCTGGTGGTTTATCT
GCTATGAAGAAGTTCCAGTCGTTGGATAGACAAGCTCGTATTGAAACCAATGATACCTAC
TTGGACTCCATACATCAAAATGCTATAACCAGTATTAATTTGTACGAGGGTACCAAGGCT
AATGCTGTCAAGTTCAGTACTTCTGGTCTAGACGGTCAGCTGGTCGTTTGGGATTTGGTC
TCCCTCGAGAAGTCCATTGAATCCCTGAAGATTTTCTAA
Protein sequence:
MAQTLTLGDSCAPITCHAWNKERNQIAFSPNNNEVHIYQKEGNEWKQTNNLVEHDMRVMG
IDWAPNTNRIVTCSVDRNAYVWTQSEDGKWTTTLVLLRINRAATCVKWSPMENKFAVGSG
ARLISICYFEKENNWWVSKHIKKPIRSTVTTLDWHPNNILLVAGSTDFKVRVFSAYIKDI
EDQPGPNVWGSKLPLGQLLAEFPSAGNGWVHSVSFSADGNKVAWVGHDSSINVADASNGR
AVIKHRTEYLPFLGCIWISNNSLVVAGHSCIPLLYCHDGGEIKFVAKLDNTQRKESGGLS
AMKKFQSLDRQARIETNDTYLDSIHQNAITSINLYEGTKANAVKFSTSGLDGQLVVWDLV
SLEKSIESLKIF