New model in OGS2.0 | DPOGS207805  |
---|---|
Genomic Position | scaffold360:- 72161-91804 |
See gene structure | |
CDS Length | 4044 |
Paired RNAseq reads   | 1683 |
Single RNAseq reads   | 4078 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005497 (1e-98) |
Best Drosophila hit   | RhoGAP1A, isoform B (2e-174) |
Best Human hit | breakpoint cluster region protein isoform 1 (1e-92) |
Best NR hit (blastp)   | PREDICTED: similar to CG40494-PA.3 [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG40494-PA.3 [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0005096 GTPase activator activity GO:0035023 regulation of Rho protein signal transduction GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0005622 intracellular |
InterPro families    | IPR001331 Guanine-nucleotide dissociation stimulator, CDC24, conserved site IPR000219 Dbl homology (DH) domain IPR001849 Pleckstrin homology domain IPR000198 Rho GTPase-activating protein domain IPR011993 Pleckstrin homology-type IPR008936 Rho GTPase activation protein IPR008973 C2 calcium/lipid-binding domain, CaLB |
Orthology group | MCL11629 |
Nucleotide sequence:
ATGAGTGTCTTCGGAGATTTTCAGCGTGTGTGGGTGCAACGGTTTCCTGAGAGTGCCCTC
CCAGCAGCTTGGGAGGAAGATGTCAGAGCCAATTTGGCTAAACATAAACAGAAAGTTGCG
ATTCTTAGGGAGGAGTTGGAGAAGGAAGAATTCTACGTTGAATATTTAGAGACTCTTTTG
TCAGACGTTGAAAAACATAAAGCATCTCAGGAAAGCAGAACGGCGCCGCCCTCAGGGGCT
GACACGAATGATGATAAGACATCTGATAGCAAACAGGATTCCAACACTGACTCATTATCA
AAGAAGAGTGAATCAAGTTTGAAGAGCGATGACTCAATAGAGGGAGCCGAGAATGATGAG
GTCCATCTTAGGAAGAAACCGATAAACTTTGCGGAGAGGAGTTCTGTTAACCAATGCATA
AATGAACTATCATCAAATCTGGCAGCAGAAGCTCGTAGACGTTGTAATAGTGAAATCGTA
CAACGAACTGACAATGAAAATAGTGTAGATGTAGAACCAAATAAGACACAAAGCAAAAAC
CGTCCAGCATCACAAGCCGGTGATTTTGTTACTGTGATTGAAGTGAATGGTCTCAAAGCA
GCTGAGAAGGCAGCCAAGAAGTCGGATGATTCTACTCCGTCATCTGAAAGTAATTCGTTA
GAATCAGCACCTCCTGTTAAGAAGAAAGTACCTCCAAAACCACCACCGAAAGTGTTCAAC
AAGCGTGGCGCTTCGCTGCCGGAGTCGGGTCTAGCGGAGGACAGCCCTCCATCCTCCTTA
CGACGGCTGAGGAACGCTGACTCCAGGGAATCCATCACCAGCCGAGCCTCTACACCATCC
ATAAGCGAAAGAGTTAAAAGCTATGAATCAATCAATTCATTGTCATCGGAGCGCAAGCGT
TCAGGGGGTGCAGCTACGCCTCGGTCGATAGACGAGGAAGTAACTTCAACGACTCCCGAT
CTACCCGAGGGTTCTGATGATAAGTCAGCACCAATATCCCTGGAGAGTATACCGGCTGTG
CCCTCGACCGAGGACGAACCTTACTACGATCAGGTCCCTGTCGATATCAACGATGGAGAA
TACGTTTACATACAAGCCGGAGGCGCCGGTACTAGCTCCAGCGCGGAGGAAGTCAGCGCG
GTGCCGGCCGCCTCCGCCCCGCCAGCTCCCGACTCTCCGCCCTCCGCCGTCGCACCGAAC
TACGTCAACATACACTACTTCATACAACATGCCGGTGAAGGTACGGAACCAAGTGAGACC
GGTGAACTGGCTGACTCCAGCGATACACCGCTTCTGTTGAGGACCATATCGTCTGACACA
GAAGCCAGCGCCACACCACCCGTACTAAGAAAACTACAGCAACAGGAATCTATAATAAGC
AACAACGCTGAGGCTGAAAGGCTGACCATGCACAGATGTATCGTCACCAGTATTATAGAG
AGCGAGACTGTCTACGTAGAATGTCTCTATGTGATGGAAAAGTACATGAACGCTATAAAA
GCGACTCTGTCGACATCGCAGCCCGTTATAACGGAAGAGGAATTCGGTACAATATTCTAT
AAAATATCAGAATTGCACGAATTGCATAAGAACTTTTTGGAGGGTCTCAAAAATGCAGTC
GCCAGCTGGGAGGAACCGCTCTCCGTCGGTATACATTTCAAAAAGATGGCGGAGAACATC
AACGTATACGGCGCTTTCCTCCACAACTACGGTCGCGCTACGGACGCTGTGCGACGCAGG
TGTGGCAGCTCCCAGCGGTTCGCGGACCTCACGAGGGAGATAGCCTGCAGGGGACAACCT
GTGTCGCTGGACGACCTGCTGCATAAACCTGTCGCCAGGGTCCAGAAAAACGCGCTCGTG
CTACATGATCTTATTAAGTACACTCCAGCGAGTCACCCCGACCATGCTATGTTAACAGAT
GCTCTAAACATGACGCAACATTTCCTTGACGAATTTAATATAATCCAAACGAAATCAATG
TTCCCCAATGCAGACAGAGCTCAACGGCGTCTGGTTAAAAATTCATTCATAGTCGAACTG
TCAGATGGTCATAGGAAACTGAGGCATCTATTCCTCTTCAATGACGTCATAGCTTGCGCA
AAGTATAAGGCTTCCGGTAGGGACAAGTTCACATTCGAGCTGAAGTGGTTCATACCGCTG
CCTGATATAGTAGTCGTGGAGGATGAAGGAGCAAACGCGGCGGCCGAGCGAGAAACGTCC
CCCGCTAACATCGTAGCGCTGAAGTCGCAGGCCTGCACTGTCCGCGATCAGATACTGGCC
GAGGAACGCGCCGCGCACGACGACAAGAAAATCCGGCTCGGCGGACGCGGCACAGCAGAG
AAGCAACGCAAGAAGTTAGCGGAACTGGAGGGTCAGCTTGTTCTGGCGTCACCCAACCTC
GTGTTCCGAGTCGGGGCCAAAGCGCCCGGGGGCACCGCCTTACAAAGACACCACGTCTTT
TTCCTCAGCTCAGAATACGAGAGGACTCAGTGGATTGATTCCATACATGCGTTGCAGGCC
TCATCCGCGCCGCCGGCCGGCACTAGCACAGTGTCTATGCTGGAGCTGCAGGGCTGGGTG
ACGGCTTGCCGCAGTTATTTACAGACGGACATGGGCTCGTACCTGCTAAGGAGTGGTCGC
GACGACTCGCTGCTGCTGGGAGACCTCCAGCTGCATATAGGAGGGATGACCGCGCCTCTG
GATACAGCAGCTGACTACTACATAGTGGTGGAAGTAGATTCGTACGGCCATTATTTCCGT
AAGGCGAAGTCTAAGCTGATCTGCCGCAGCGCTCAGCCTCGTTGGAACGAGAGCTTCACT
CTGGACCTGGAGGGGTCACAGAACCTCAGGCTTCTGTTGTATGAGGACGCTGCCAGGCCT
GTACTGAGAGGGAAATGTACTCTTAAGTTATCCCGGGAGTGGGTGGGCGAGAGTGTGTCG
CGCTCTGTGTGTGTCGGAGGCGGGTCTCTACCTCTTCGTCTCCGCGTGTTGCCGCCCGAG
CGCTCCGCCCGCCACGTGCCCAGCGCCAAACCGGGGGCGCTGTTCGGAGCTAAGATCACT
CATGTCGCCAAACGTGAGAAGCGCAACATCCCATTCATAATAAGCGCGTGTGTCCGGGAA
GTGGAACGTCGGGGTATCAGCGAGGTGGGCATCTACCGCGTGTCAGGAAGCGCCTCCGAC
CTCAACCGGCTGAGGAAGAGCTTCGAGACCAACGCCTATGAAGCGGAACAGCTGCTCAAG
GAGGTGGATGTCCACTCGGTGACGGGAGTCCTGAAGCTATATCTCCGGGAGCTGCCTGAA
GCGCTGTTCACAGACGCTCTATATCCAGAGCTACTAAAAGCTTGGGGCTCCACGCCGAGA
TTGACGTTGATGAAGTGTGATGAAAGAAAACGACGTGAGAAGCGCAACATCCCATTCATA
ATAAGTGCGTGTGTCCGGGAAGTGGAACGTCGGGGTATCAGCGAGGTGGGCATCTACCGC
GTGTCAGGAAGCGCCTCCGACCTCAACCGGCTGAGGAAGAGCTTCGAGACCAACGCCTAT
GAAGCGGAACAGCTGCTCAAGGAGGTGGACGTCCACTCGGTGACGGGAGTCCTCAAGCTA
TATCTCCGGGAGCTGCCTGAAGCGCTGTTCACAGACGCTCTATATCCAGAGCTACTAAAA
GCTTGGGGCTCCACGCCGGGTGTGGGCAACTCTACGGATTCAGCGCCGGCGCACACCAGA
CGACACGCTCTTCTGAAATGTTACGCACAACTCCCGGATCTGAATAAGAACTGCATCGAC
TTCCTTTTAAACCATTTCGTCAAAGTAAACAACCACGAGTCCGAGAACAAGATGTCTCTA
CACAACCTGGCGACCGTATTCGGCCCAACATTGTTACGTCCGAGCGCTGCGGGCGGCAAG
CTTCGCGCGGACCAGTTGGCCGCTGGAACCGTGGACGCCATGGCGCAGGCCGGCATCCTG
TACACGCTGCTGCAGCAGCGGCACCTCGCGCAGCACCTCACCGCACACCGCCACGCGCCG
CACGCGACTAACCCGCTAGACTGA
Protein sequence:
MSVFGDFQRVWVQRFPESALPAAWEEDVRANLAKHKQKVAILREELEKEEFYVEYLETLL
SDVEKHKASQESRTAPPSGADTNDDKTSDSKQDSNTDSLSKKSESSLKSDDSIEGAENDE
VHLRKKPINFAERSSVNQCINELSSNLAAEARRRCNSEIVQRTDNENSVDVEPNKTQSKN
RPASQAGDFVTVIEVNGLKAAEKAAKKSDDSTPSSESNSLESAPPVKKKVPPKPPPKVFN
KRGASLPESGLAEDSPPSSLRRLRNADSRESITSRASTPSISERVKSYESINSLSSERKR
SGGAATPRSIDEEVTSTTPDLPEGSDDKSAPISLESIPAVPSTEDEPYYDQVPVDINDGE
YVYIQAGGAGTSSSAEEVSAVPAASAPPAPDSPPSAVAPNYVNIHYFIQHAGEGTEPSET
GELADSSDTPLLLRTISSDTEASATPPVLRKLQQQESIISNNAEAERLTMHRCIVTSIIE
SETVYVECLYVMEKYMNAIKATLSTSQPVITEEEFGTIFYKISELHELHKNFLEGLKNAV
ASWEEPLSVGIHFKKMAENINVYGAFLHNYGRATDAVRRRCGSSQRFADLTREIACRGQP
VSLDDLLHKPVARVQKNALVLHDLIKYTPASHPDHAMLTDALNMTQHFLDEFNIIQTKSM
FPNADRAQRRLVKNSFIVELSDGHRKLRHLFLFNDVIACAKYKASGRDKFTFELKWFIPL
PDIVVVEDEGANAAAERETSPANIVALKSQACTVRDQILAEERAAHDDKKIRLGGRGTAE
KQRKKLAELEGQLVLASPNLVFRVGAKAPGGTALQRHHVFFLSSEYERTQWIDSIHALQA
SSAPPAGTSTVSMLELQGWVTACRSYLQTDMGSYLLRSGRDDSLLLGDLQLHIGGMTAPL
DTAADYYIVVEVDSYGHYFRKAKSKLICRSAQPRWNESFTLDLEGSQNLRLLLYEDAARP
VLRGKCTLKLSREWVGESVSRSVCVGGGSLPLRLRVLPPERSARHVPSAKPGALFGAKIT
HVAKREKRNIPFIISACVREVERRGISEVGIYRVSGSASDLNRLRKSFETNAYEAEQLLK
EVDVHSVTGVLKLYLRELPEALFTDALYPELLKAWGSTPRLTLMKCDERKRREKRNIPFI
ISACVREVERRGISEVGIYRVSGSASDLNRLRKSFETNAYEAEQLLKEVDVHSVTGVLKL
YLRELPEALFTDALYPELLKAWGSTPGVGNSTDSAPAHTRRHALLKCYAQLPDLNKNCID
FLLNHFVKVNNHESENKMSLHNLATVFGPTLLRPSAAGGKLRADQLAAGTVDAMAQAGIL
YTLLQQRHLAQHLTAHRHAPHATNPLD