| New model in OGS2.0 | DPOGS207806 |
|---|---|
| Genomic Position | scaffold360:- 65141-66415 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 329 |
| Single RNAseq reads | 1046 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005498 (4e-141) |
| Best Drosophila hit | Sas10 (3e-58) |
| Best Human hit | something about silencing protein 10 (2e-47) |
| Best NR hit (blastp) | PREDICTED: similar to something about silencing protein 10 [Tribolium castaneum] (4e-100) |
| Best NR hit (blastx) | PREDICTED: similar to something about silencing protein 10 [Tribolium castaneum] (4e-98) |
| GeneOntology terms | GO:0016458 gene silencing GO:0005634 nucleus |
| InterPro families | IPR018972 Something about silencing protein 10 (Sas10), C-terminal IPR007146 Sas10/Utp3/C1D |
| Orthology group | MCL14687 |
Nucleotide sequence:
ATGGATAACTTACGAAAGAGAAAGCATCAAGATTCCGGTAGTGAAGAGGAAGTTTATGGA
TTTTCTGAGTCAGAAGATGATGACAAGAGTGATTTGGGAATGGCTGACAGTGATGTTGAG
GGCCAAGAGAAGTCAGATGACGACTTACCAGACTCCAAAGCTTGGGGAAAAAAGAAACAG
TCTTATTATTCAACTGATTTTGTAGATGAAGATTATGGTGGATTTGGAGATGAGGAGGAA
AATGCTCTCATGGAGGAAGAAGAAGCTAAAAACATACAAAAACGATTGATTGAGCAACTT
GGAGAGGAAGATTTCACTTTAGAGTTCTTCAATGAACAAAGTACCAAAGCTGATGATAAA
GAGACTGTCATAAAAAGTGATGTAAGTCAAATGTCCAAAAGGCAAAAATTACAATTACTC
GAAAAGGAAAGCCCAGAATTCTCAGGTCTTATTGATGATTTCAAATCAAAGCTAACAGTC
GCAAAACAAGACTTGAGTCCTGTTCTAGAACTAGTGAAAGGTGGAAAAATCCCAGACTGC
TCTGCTTCCAAATTTGTTAAAACTAATTATGACCTTATATTAAACTACTGCACAAACATT
AGTTTTTATTTATTGTTGAAAAGCAGAAGAATTAATGTACAAAACCATCCTGTCATTAAA
AGGTTATATCAGTACAGACAAATGTTGAAGAAAATGGAACCAATATATCTTGAAGTGATC
AAGCCACAGATAGACAGTATAATGAGTATAGTCAAAAATAATCTGAAACTTCAGATTAGA
GAACAGAGAAATAAGAAGCGCAAATCAGGAAAGGATTCAGAATATCCAGCAAAGAAACTC
AAATTGATCAATGCTAATGAATCTGATGAGAGCGGTTTCTCAGATAATAATGAAATTGAT
GAACAAAAGCCTTCCACATCAAGCCAAGATATATTGCCTGGAGATGTTGTTGATAAAAGA
GAGATAACATATCAAATTGCCAAAAACAAAGGCTTGACACCACACAGGAAGAAGGAACAA
AGGAATCCACGGGTGAAGCATAAGCTTAAATATAGAAAAGCTAAAATAAGAAGGAAGGGA
GCCGTTAGAGAAGCAAGAACAGAAGTTACTAGATATGGCGGAGAGGCATCAGGTATTAAG
GCTAATGTTAAAAAGAGCATTAAAATAAAATAG
Protein sequence:
MDNLRKRKHQDSGSEEEVYGFSESEDDDKSDLGMADSDVEGQEKSDDDLPDSKAWGKKKQ
SYYSTDFVDEDYGGFGDEEENALMEEEEAKNIQKRLIEQLGEEDFTLEFFNEQSTKADDK
ETVIKSDVSQMSKRQKLQLLEKESPEFSGLIDDFKSKLTVAKQDLSPVLELVKGGKIPDC
SASKFVKTNYDLILNYCTNISFYLLLKSRRINVQNHPVIKRLYQYRQMLKKMEPIYLEVI
KPQIDSIMSIVKNNLKLQIREQRNKKRKSGKDSEYPAKKLKLINANESDESGFSDNNEID
EQKPSTSSQDILPGDVVDKREITYQIAKNKGLTPHRKKEQRNPRVKHKLKYRKAKIRRKG
AVREARTEVTRYGGEASGIKANVKKSIKIK