| New model in OGS2.0 | DPOGS207758 |
|---|---|
| Genomic Position | scaffold360:+ 52294-58048 |
| See gene structure | |
| CDS Length | 2667 |
| Paired RNAseq reads | 854 |
| Single RNAseq reads | 2042 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005311 (1e-91) |
| Best Drosophila hit | CG3335 (0.0) |
| Best Human hit | probable RNA-binding protein 19 (2e-129) |
| Best NR hit (blastp) | PREDICTED: similar to CG3335-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG3335-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0004386 helicase activity GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL13912 |
Nucleotide sequence:
ATGTCGCGTTTAATAGTGAAAAATTTACCCAATAAGGTAACTGTTGAAAAATTGAAAGAT
CTTTTTGGAGAGAAGGGGGAGGTGACCGATGTCCAGTTGAAATATACTAAAGATGGCAAG
TTTAGAAATTTTGGATTCGTGGGATACAGAACAGAAGAACAAGCAGCAGCAGCAAGAGAG
CACTTTGATGGCACTTTTGTAAATAGCATGAAAATAAATGTTGAAGTATGTGCCAACTTA
GGAGATGAAAAAAAACCAAGAGCCTGGAGCAAGTATGCCACAGATAGTACTGCTTATAAA
AAGCTACATAAAGATGAAACCAGTGTCAAGCCGAAAAAAGAAAAAGTAAACAAAGCAGAG
AGAAATAAGAATAAAATAAAGGAACTATTAAAAAAGCACAAAGATGATCCATTGTTTGCA
GAATTTATCGAAGCTCATGTAAATGAAAAAACTGCATGGATAAAAGAGGCATTAGATGCG
GCGGATAAAAGTGATGATGATAGCGGTGTCGAGGATGAAACTCCGTCCAAGGATGAAAAA
GTACAAGACGATGAAGCAGAAGAGAAAAACGACATACAGGATGCTCCGCAGAAAGAAAAA
GTTGCTAATAAACAAATAAGCGATTTAGAGTATATGAAACTGTTAATGAAGAAAGTTGAT
GGCTACACAGAGGTCGATAACAAAGATGCAAAGCCAGAAGACGACAAGCCCAAGAAAGTC
CGCAATCGTCCATTGTTCTATGTTAAAATAACAGGTCTGCCGTTTAAATGTAAGAAGAAA
GACATAAAAGAATTTTTCAAACCTTTAGTGCCATTTTCAATAAGACTGCCTCTTGGCAAA
GGGAAGAAGTTAGCCGGATTCTGTTATGTTGGTTTCAGAACAGAAAAGGAATTAAACAAA
GCCCTTAACAAGGACAAACTTTTCATAGCAAATCATCGCATTCATGTGCACAAGTATGAA
GACAAAGCAAAAATTGCTGCAGAACAGGAAGAGTTGCATAACAACAAAAAGAAACAAGAG
CAAGTAAATAACGGGGAGAGTATTGGTGAGAGTGGTAGAATATTTGTAAGGAATTTGCCA
TATGTTGTATCAGAAGAAGAGTTGACCAGCTTGTTTGAGAAGTATGGCCCTATCGCAGAA
GTTTCAATGCCAATAGACCCAATCCTCCGTCAGCCCAAAGGGTTTGCTGTCATAACGTTT
GTGATGCCGGAGCACGCTGTAAAGGCTTATACTGAACTAGACGGAACCGCTTTCTGTGGA
AGAATGATGCACATACTACCAGCAAAGATGGAGAAGCTTGAAGAGGAGATTGATGAGGAT
CTGCCATTCAAAGAAAAGAAAGCCTTAAAGTTGAAGCAGCAAGCCAAGTCATCTCACAAT
TGGAATGTTCTGTTCCTCGGTGCCAATGCTATAGCTGATGTGGTCGCTTCCAGTTACAAC
ACAACCAAGGAACAACTGCTTAGTGATAATAATAAGAATACAAGTGCAGCTGTCAGACTT
GCCTTGGGAGAGACACAGCTGGTCGCTGAAACTAAAGAATTCCTTGAATCAAATGGCGTA
CATCTTGACGCTTTTAATAGACCAGCCAAAAAGAGATCCAAAACATGTATACTAGTGAAA
AATCTACCAGCCGGTACTGACAAAGAGGAAATCAGAAATTTGTTTGTTAAGCACGGACAA
TTGGCGAGGTTTCTGATGCCGAGGCACGGCATCACAGCGCTGGTTGACTTCATAGAACCT
TTCGAAGCAAAGAAAGCCTTCGGCAAACTAGCGTATTCACAGTACAAATCGGCGCCGCTA
TATTTAGAATGGGCGCCAGAGAATGTGTTCGTCAAAGACGCTAAAACGGAAACTGTATCC
GGCAAAGAAACGAGTGATGTGAATAAAACGGAAGCAGAGTCGGGTGACGAAACTAGTGTT
AAAGAACCTGAAACGAAAATGGTTGAAGAACCGTCCAACGAACAACCAGAAAATGATACG
ACGTTGTTCATCAAAAATCTCAACTTTAAAACTACAGAGGAGACATTGAAATCGCATTTT
TCTGCCTGTGGGAAAGTTCACAGTGTGGTCATAGCCAAGAAGAAAGATCCCAAAAACCAA
ACTCAACTTCTATCCATGGGCTATGGTTTCGTACAATATATTAAGAAGACAGACACTCTC
GAAGCCCTCAAAGTATTACAGGGGTCAACACTTGATGGCAAAACTTTAGAACTGAAGCGG
TCTGAGAGAGGAAATATAACCGAAGTCAAAACATCAAAGAAGACATCGAAGGACACTATA
CAAAACGGCACCAAGATTCTAATACGAAACGTGCCGTTCCAGGCGAATAGGAAAGAATTA
CATGAGATATTTAGAGCATTTGGAGAAATTAAAACGCTGAGGCTTCCACAAAAACTAACA
GTGGGTTCGGAACAACATCGAGGGTTTGCGTTCGTTGATTATTACAGCAAAGCAGATGCA
AAGTCTGCATTTGATGCTCTGTGCCAATCGACACATTTGTATGGTAGACGCTTGGTATTA
GAGTGGGCGGATCAGAGCGATGAAAATGAAGATATAGATTTGTTAAGAAAAAGGACGGCC
GAGAAATTCAACGCTAAGTCACCTGGCGGGAAGAAATCTAGAAAAGGCGCCGTTGACGTT
GATACGTTTGTTGATGTTGATATGTAA
Protein sequence:
MSRLIVKNLPNKVTVEKLKDLFGEKGEVTDVQLKYTKDGKFRNFGFVGYRTEEQAAAARE
HFDGTFVNSMKINVEVCANLGDEKKPRAWSKYATDSTAYKKLHKDETSVKPKKEKVNKAE
RNKNKIKELLKKHKDDPLFAEFIEAHVNEKTAWIKEALDAADKSDDDSGVEDETPSKDEK
VQDDEAEEKNDIQDAPQKEKVANKQISDLEYMKLLMKKVDGYTEVDNKDAKPEDDKPKKV
RNRPLFYVKITGLPFKCKKKDIKEFFKPLVPFSIRLPLGKGKKLAGFCYVGFRTEKELNK
ALNKDKLFIANHRIHVHKYEDKAKIAAEQEELHNNKKKQEQVNNGESIGESGRIFVRNLP
YVVSEEELTSLFEKYGPIAEVSMPIDPILRQPKGFAVITFVMPEHAVKAYTELDGTAFCG
RMMHILPAKMEKLEEEIDEDLPFKEKKALKLKQQAKSSHNWNVLFLGANAIADVVASSYN
TTKEQLLSDNNKNTSAAVRLALGETQLVAETKEFLESNGVHLDAFNRPAKKRSKTCILVK
NLPAGTDKEEIRNLFVKHGQLARFLMPRHGITALVDFIEPFEAKKAFGKLAYSQYKSAPL
YLEWAPENVFVKDAKTETVSGKETSDVNKTEAESGDETSVKEPETKMVEEPSNEQPENDT
TLFIKNLNFKTTEETLKSHFSACGKVHSVVIAKKKDPKNQTQLLSMGYGFVQYIKKTDTL
EALKVLQGSTLDGKTLELKRSERGNITEVKTSKKTSKDTIQNGTKILIRNVPFQANRKEL
HEIFRAFGEIKTLRLPQKLTVGSEQHRGFAFVDYYSKADAKSAFDALCQSTHLYGRRLVL
EWADQSDENEDIDLLRKRTAEKFNAKSPGGKKSRKGAVDVDTFVDVDM