| New model in OGS2.0 | DPOGS207767 |
|---|---|
| Genomic Position | scaffold360:+ 145837-148102 |
| See gene structure | |
| CDS Length | 1404 |
| Paired RNAseq reads | 742 |
| Single RNAseq reads | 1420 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005318 (7e-88) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | unknown [Picea sitchensis] (1e-102) |
| Best NR hit (blastx) | unknown [Picea sitchensis] (8e-93) |
| GeneOntology terms | ND |
| InterPro families | IPR000372 Leucine-rich repeat-containing N-terminal IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL39947 |
Nucleotide sequence:
ATGAAGAACTGGCCTCTGCACATAGTTTTAGTGGCGACCTTCGCGGTCGGCTACATATCA
GCACAGAATGAAGACGAGTTACACATACCCATGGAACCTGATAATCAATTCCCACCAGAT
CATTCAGAAGCAGACGGTCTAATAGAGGGCAGTGGGGATGGAGTGATGGATGCACCAGAA
GAAAATGTCACTACTGAAGCTAATAAACTTAGCGGTGTGCAAGTGTCGACGCTGCTACAT
GATGATGAATCAGAAACACAGTCGAATTCCTCTGATCTACCATGTCCGAAACCTTGCGTG
TGTCACACTGAAGGGGACGCTGAAGACTTTGTAGTTGATTGTTCAGGATATGGACTAACG
GAATTTCCCTCACCCATAGATCCCAGAACGACCACTTTAAAATTACACAACAACAAACTC
ACCGAAATACCAAAAGCAGTTTCCGAGCTTCAAAAGTTGAAAATTTTAAATGCCAACAAC
AATTCTATTATGGAATTAGGACTTGGGTCAGTCAGTGAACTACCTGAGTTAGAGATTCTA
AAGCTGGCCAACAATCGATTAATAGAATATCCAAAGGATTTAAAGAATAGTTTCTCCTTA
AATAAATTAAAGGAACTGGACATCGGTGGCAATGACATCCGAACGGTCCTTTCTCCAGAA
TTATTTTCAAGTTTTAAAAAGTTAAACAAAATAACACTACCGGAGAGTGGTTCTGGTATT
GCTTTAGACCTGTGTACTTCTTTACTGGGGAGCTTAGAAACTGTGTGCACAGAATCATGT
GCATCAAAAACATTCGATTGTCCTAATGCTCCACCAAATATAGAAGAGGACCTGCTGGAT
GCGACATTGCCAGGCATGATTCCATTGCTATCGGACCACGACGATAGCAACAGTGACCCT
GGCGTGAAGTCTGATAATACTAAGCATGAACAATCTTCTAATGTCCCACCATTGCAAGCT
GCGAGCGATGACGACCAACCAAATGTACAAACTACAGTAGCAACTCCAGTTACACCACCA
GCATCAAAAGAGGAAACTACAGCGAGCAGTGGAAACCTACCAGTAAATGAATTCTCCCTT
CGAAAGGCTGTTGATAATGCTTCAGAAGATAATATAAAAGCAAATGCGGAAATTGAAAAA
CTTAACGAATCTACTACAGCTCAGCCAGTGGTTAAGGTTGGAGCCGCCATTGACGGTAAA
AAATCTGGAGGAGTTGATAAAAGTGTTATAGGTATCATAGTCGCTGGTATGATTGTGATT
GTCGCTGTTGTTTCAATTAAGAAAAACTGGAGCTCCATTAAGAAAAGGTTCAGTTCGACG
CCGAGACCTAATGAGAGGTCTGATGGGAATGCAAATGGCACAACACCTGAAGAAGTCCCA
TTACAAGACAAATCACCTGTTTAA
Protein sequence:
MKNWPLHIVLVATFAVGYISAQNEDELHIPMEPDNQFPPDHSEADGLIEGSGDGVMDAPE
ENVTTEANKLSGVQVSTLLHDDESETQSNSSDLPCPKPCVCHTEGDAEDFVVDCSGYGLT
EFPSPIDPRTTTLKLHNNKLTEIPKAVSELQKLKILNANNNSIMELGLGSVSELPELEIL
KLANNRLIEYPKDLKNSFSLNKLKELDIGGNDIRTVLSPELFSSFKKLNKITLPESGSGI
ALDLCTSLLGSLETVCTESCASKTFDCPNAPPNIEEDLLDATLPGMIPLLSDHDDSNSDP
GVKSDNTKHEQSSNVPPLQAASDDDQPNVQTTVATPVTPPASKEETTASSGNLPVNEFSL
RKAVDNASEDNIKANAEIEKLNESTTAQPVVKVGAAIDGKKSGGVDKSVIGIIVAGMIVI
VAVVSIKKNWSSIKKRFSSTPRPNERSDGNANGTTPEEVPLQDKSPV