| New model in OGS2.0 | DPOGS204243 |
|---|---|
| Genomic Position | scaffold333:- 86967-88292 |
| See gene structure | |
| CDS Length | 1326 |
| Paired RNAseq reads | 944 |
| Single RNAseq reads | 2622 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007518 (5e-179) |
| Best Drosophila hit | TBPH, isoform F (8e-101) |
| Best Human hit | TAR DNA-binding protein 43 (6e-84) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006055 [Tribolium castaneum] (3e-119) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006055 [Tribolium castaneum] (3e-113) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0008344 adult locomotory behavior GO:0007528 neuromuscular junction development |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL11836 |
Nucleotide sequence:
ATGAGTAATAAAAGTAATTATAACGAAGACCTTTTCGAATACATTAAAGTTAGTGAAGAC
GAAGATGATTCCAACGCAGTTGAGATACCTTGCGAACATGATGGCACTATGTTGTTGTCA
ACACTTGTGGCACAATTTCCTGGCGCGTGCGGATTAAAATATCGTCATCCTGATAGTAAA
GCTACTCGCGGTATTCGTTTAAGCGATGGTAAGCTTCATCCACCTAGTGATGCCGGCTGG
GGTAAACATTTGTACATTTGTGTATTTCCAAAAGAAAACAAACGAAAGATGGAAGACGTT
TCGCCGGAAAATTCAGCGGCTAAAACAAAACGCTTAGAAAAAAAACTCACTTGTTCGGAT
TTGATTTGTCTTGGTTTACCATGGAAAACAACTGAAGAATCTATAAAACAATACTTTGAA
CAGTTTGGTGAAGTTGTTATGGTTCAGTTAAAACGTGACAAAAACGGCTCTTTTAAAGGA
TTTGGATTTATACGTTTTGCAACTTACGCCTCACAAATGAGAGCTCTTGCTCAGAGGCAC
AATATTGACGGGCGCTGGGTTGATGTTCGCATTCCCAATTCTAAAGAAGGGGTAGTTCCA
CAAATGCCGTGTAAAGTGTTTGTAGGCAGATGTACAGAGGATATGACGGCAGACGATTTG
AGGGATTATTTTTCTCGATTTGGTGAAGTAACAGACGTGTTTGTACCAAGACCTTTCAGA
GCATTTGGTTTTGTTACCTTCTTAGATCCTGAAGTAGCTCAAAGTCTGTGTGGAGAGGAT
CATGTTATCAAAGGTGCATCAGTTTCAGTATCAAGTGCTGCACCAAAAATTAAAAGTAAA
TCCAATCCTAACTGGAAAGATGACTCTTATGGTCCAAGCAACTGGGAAGGAGGTCGATCT
GGGTCTTCTGGTTCCGGTGGTAATGGAAGTAATAATAACATTGATACATTAAATATGCAG
AACTTAGGTATTAATCCTAATGGTGGACCGCCAGCTAATTTCAATTTGCCAATAAGTCTT
GTTGCTGCTGCACTTAATCAAGCTGGTTGGGGTGGATTCTTAGGAGGACCAGGAAATTCA
AATAATTGGCAAGGACCTCCTCAAGGTAATTCAGGCAAAGGTTGGAACAATAATCAAAAT
TGGGGTCAAAATGGTCCACCAGCCTGGAGTCAGAGCAGTAATCCTGGGTGGTCTGGAAGT
AAGAGCGGGAACTGGAATCAAGGAAATTGGCCTAATGGACAAAATTGGGGAGGTAATGGT
GGAGGTGGCTCAGCTCCCTCAGGATCTAGCAGCGGGTGGAATAATAACAACAAGCCCCAG
ACATGA
Protein sequence:
MSNKSNYNEDLFEYIKVSEDEDDSNAVEIPCEHDGTMLLSTLVAQFPGACGLKYRHPDSK
ATRGIRLSDGKLHPPSDAGWGKHLYICVFPKENKRKMEDVSPENSAAKTKRLEKKLTCSD
LICLGLPWKTTEESIKQYFEQFGEVVMVQLKRDKNGSFKGFGFIRFATYASQMRALAQRH
NIDGRWVDVRIPNSKEGVVPQMPCKVFVGRCTEDMTADDLRDYFSRFGEVTDVFVPRPFR
AFGFVTFLDPEVAQSLCGEDHVIKGASVSVSSAAPKIKSKSNPNWKDDSYGPSNWEGGRS
GSSGSGGNGSNNNIDTLNMQNLGINPNGGPPANFNLPISLVAAALNQAGWGGFLGGPGNS
NNWQGPPQGNSGKGWNNNQNWGQNGPPAWSQSSNPGWSGSKSGNWNQGNWPNGQNWGGNG
GGGSAPSGSSSGWNNNNKPQT