New model in OGS2.0 | DPOGS204246  |
---|---|
Genomic Position | scaffold333:- 46216-47418 |
See gene structure | |
CDS Length | 807 |
Paired RNAseq reads   | 96 |
Single RNAseq reads   | 369 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007520 (1e-15) |
Best Drosophila hit   | cyclin C (3e-115) |
Best Human hit | cyclin-C isoform a (9e-98) |
Best NR hit (blastp)   | g1/s-specific cyclin c [Aedes aegypti] (2e-134) |
Best NR hit (blastx)   | g1/s-specific cyclin c [Aedes aegypti] (8e-133) |
GeneOntology terms    | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex |
InterPro families    | IPR015429 Transcription regulator cyclin IPR006670 Cyclin IPR006671 Cyclin, N-terminal IPR023598 Cyclin, C/H/G types IPR013763 Cyclin-related IPR011028 Cyclin-like |
Orthology group | MCL13980 |
Nucleotide sequence:
ATGGCTGGAAACTTTTGGCAAAGTTCTCACCATCAGCAATGGATTTTAGACAAACAAGAT
CTCATACGAGATCGCCAACACGATTTAGCTAAATTGACGGAAGAGGAATATCAAAAAATA
TTCAATTTCTTTGCTAGCATAATACAAGTATTAGGCGAACAGTTAAAATTGCGTCAGCAA
GTAATAGCGACCGCTACTGTTTACTTTAAAAGATTCTATGCAAGAAACTCCTTGAAATGC
ATAGATCCGTTGCTTCTAGCTCCTACCTGCGTTTTTTTGGCGTCAAAAGTAGAAGAATTT
GGTGTTATTTCTAATTCAAGATTAATAACAACATGTCAAACAGTTATCAAGAATAAATTC
AGTTATGCTTATGGTCAGCAGGAGTTTCCTTACAGAACAAATCATATTTTGGAATGTGAA
TTCTATTTACTGGAGAACTTAGACTGTTGTCTGATTGTATATCAACCATACAGACCCCTG
TTACTCTTTGTTCAAGACATTGGCCAAGATGATCAACTTCTTACCTATGCTTGGAGAATT
GTTAATGACTCTTTACGAACTGATGTTAGCTTACTATATCCCCCATATCAGATTGCGATA
GGAGCACTTCATATTGCATGTGTAATGCTAGGCAAGGAAAATTTAAAGCCTTGGTTCGCC
GAATTGAATGTTGACATGGACAAGATCCAAGAAATAGTAAGGTTAATTATCAACTTATAT
GAAATGTGGAAAAGTTATGATGAAAAGAAAGAAATCCAGGGCCTCTTAGGAAAAATGCCA
AAACCAAGTCCAGCACCTCAAAGATAA
Protein sequence:
MAGNFWQSSHHQQWILDKQDLIRDRQHDLAKLTEEEYQKIFNFFASIIQVLGEQLKLRQQ
VIATATVYFKRFYARNSLKCIDPLLLAPTCVFLASKVEEFGVISNSRLITTCQTVIKNKF
SYAYGQQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLLFVQDIGQDDQLLTYAWRI
VNDSLRTDVSLLYPPYQIAIGALHIACVMLGKENLKPWFAELNVDMDKIQEIVRLIINLY
EMWKSYDEKKEIQGLLGKMPKPSPAPQR