New model in OGS2.0 | DPOGS204297  |
---|---|
Genomic Position | scaffold333:+ 38922-42727 |
See gene structure | |
CDS Length | 2712 |
Paired RNAseq reads   | 735 |
Single RNAseq reads   | 2158 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007574 (2e-96) |
Best Drosophila hit   | CG33331 (2e-56) |
Best Human hit | MMP37-like protein, mitochondrial precursor (5e-55) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC030621 [Tribolium castaneum] (3e-97) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC030621 [Tribolium castaneum] (9e-92) |
GeneOntology terms    | GO:0015031 protein transport GO:0006810 transport GO:0055085 transmembrane transport GO:0005739 mitochondrion GO:0008150 biological_process GO:0003674 molecular_function |
InterPro families    | IPR015222 Mitochondrial matrix Mmp37 IPR022226 Protein of unknown function DUF3752 |
Orthology group | MCL14270 |
Nucleotide sequence:
ATGATCGACCTGATATACTGCGTCGATAATTCTTATCGTTGGCATGGTGCTAATATTGAG
ATGAACCCGTCCCATTACTCCGCACTCCGATTTCTGGGCAAGGGATTTGTTGCAAGATTT
CAAGAAAATTGGGGTGCTAAAGTTTATTTCAATACTCTCGTTGACATAAAAGAAGAAAAC
GTAACTATTAAATATGGTGTAGTATCACAGAAAGACCTTATTGCAGATCTTCTGGATTGG
AATGACTTATATCTCGCTGGTCGTCTTCACAAACCCGTAGAGATCATCAAACAAACCAAC
AGTTCCCAACTGCAAAATGCACTACAAGCTAATTTAAGATGTGCTGTTCACACAGCTCTA
CTTATTTTACCAGAAACATTTTCTGAGTATGATTTTTATTTTGCTATATCTAACTTAAGT
TATGCAGGTGACTTTAGAATGACATTTGGAGAGAATAAAAATAAAGTTAGAAACATTGTA
CAACCACAGTTGTCTAATTTCCGGGAGCTCTACAGACCAATCTTGCAGCAATTCCATGCC
TATGTGGATTTCCCAACTGGAGATACACAGTGCCATCAAGATACCAATCCTGAAACTAAG
CTTCATCATTTAATGCAGCTACCAATGGTTCCACAACAAAGGATAGTAAAGTTTTGGAAC
CATGGTGGTCCGCAGCAGGACATGGAAGATGTTCTTAGAGCTGTTGCCTATGACATTGAC
TGTGCTGTTATTTTGAGACAAATATTAAAAGATTTAGTTTGGCAATCCAGTGTGAGACAA
TCCCTAAAAGGCATACCGACGGCAGGTCCCAACATGCTGTCTGATGAATCAAGCAGTGAT
TCAGAGACTGGTAGATTTAAAACTCATGATAAGAGTAAAGAAGAAAGGTCAAATAACAAT
GGTCAAAAAAGAGATATAGCATTTGGTAGGACCTCAGAGAGAAGTAGGAGGTATGATGAC
AAATTCAAAGACATAGACAGGAGACCAGGAAATAGAGAAAAATATGACAGTCGCCCTAGA
GATGGGCATAGGTATTCAAGATACTCACCAATAAGGAGAAGACATTCTCAGGACAGAAGT
AGAAGTAGACGGTCACCTGATAGAAGAGACAGACATGAGAAGGATTCTAGAAGAAGATCC
AAACCACGAGATTTTAGGAGTAATAGTGCTGATAAAAATCGAAGTAGTAGAGATAATTAT
AGACGTTCTAGATCAAGGTCCAATAAATCCCCAATTAAAGGAAGAAGTGGAAGAGAAGAA
TTGAAAGCGGAAATTTCAGCGAAAGAAAGTAGTTCAGAAAAATCTGAGAAAAAAAGCAAG
AAGGAAAAATCATCAACACCCGAGACTGTCAGTCAGAAATCAGCAGTACACAAACCAACA
GAATCTGAAACACAGAAAAAAATGAGTAACAGTCCCATTTTAATTGATGAACAAGCCAGT
GATGGTTCTGAGATCGTTCAACCAGGATCCTATTATAGCTTGATACCAGCCATAATAAAA
GAAAAATCAGAAGAATCGAGTGAAATCGATTCTTCCGATGACGAAAAGCTTAGAGCTAAG
TTGCTAAATTTAGAAAAGCAGTTGCAAAAGACCAAAAAGAAAAAACATAAGAAGAAACAT
AAAAGAAGGAGTTTGAAATCTGATAAAGAGAAAAATGATTTATCAGCGTCTGTTGAAGTG
AGTAGTACCACTGACATTCAAGAGGTCAAACCCAAAGAACTCACACCGGTTGTAGATATA
GCAGAAGTGACGTCCACTCAAAAGAACAATCAGAAAGAGAGTAGCGAAGAAGGTGAAATT
ATGAGTGACGACTCTCAGGGGGAGATCGATATAGAGCCCACTGATTTACGTCATAAATTG
AAACGCTCAAAACTAGACAATAGCAGGACACAAAACCTTGATGTTTGTGGTCCTGCCCTA
CCACCGCACCTGGAGAAGAACTCCCGAAACAGTGAGTCTCCGACAAAAGAAGGACCATCG
CTACCACCGCATCTACAAAAAAGAAATCGTAATATTGGTCCATCCATACCAGAGGACTTA
AGGAAAGTATTAGCCGATAAAAGTGAGGAGATTCAAGTGATAAAGAGTTCTGATGACGAG
GATGGTATAGGACCTCTGCCTGCTGGGGCTGAGAATAAATGGTCGGAAGCTCACCAGCGT
CTCGAGGAAAGGGCCATTGAAATGAAAATAAAATCTCTTGATGGTCACTCCTTACAGAAC
ACGGATATCAAAACTCGAGAGCAGTGGATGCTAGAACTTCCAGAAGGAAAAGCTAAAATT
CTAGGCCTGGAAGCTCGAAGTTTCAGAGCTAAAGAGGGACCAGACATGTCTGATAGGTCG
AGTTGGACAGACACTCCAGAAGATAAAGCAAAAAAAGCATTAGGGATTGTTAAAGAAGAT
TCAAGCGAGACTCTTCAAAAGGAAGCTAAATCGCGCTGTATCTCAAACAGGGACGAGGAA
CAAGAAAAAGCTGTTAAGAAACACAAAAAGAAGCATAAAAGAGAAGAAAGCTTACTTGAC
ATTCATCAAAAGAAACTCAAGAAGAAAAAGAAGAAGGATGAAAAGGACGATGAAAAGAAA
GAACGCCGGCCATTCAGCCGTGACCTCGACCTGCAAGTGAACAGGTTCGACGAAGCACAG
AAGAAGTCCATCATCAAGAAAGCACAAGACCTTAACAACAGATTCTCAAGCGGTGAAGCA
AAGTTCTTGTAA
Protein sequence:
MIDLIYCVDNSYRWHGANIEMNPSHYSALRFLGKGFVARFQENWGAKVYFNTLVDIKEEN
VTIKYGVVSQKDLIADLLDWNDLYLAGRLHKPVEIIKQTNSSQLQNALQANLRCAVHTAL
LILPETFSEYDFYFAISNLSYAGDFRMTFGENKNKVRNIVQPQLSNFRELYRPILQQFHA
YVDFPTGDTQCHQDTNPETKLHHLMQLPMVPQQRIVKFWNHGGPQQDMEDVLRAVAYDID
CAVILRQILKDLVWQSSVRQSLKGIPTAGPNMLSDESSSDSETGRFKTHDKSKEERSNNN
GQKRDIAFGRTSERSRRYDDKFKDIDRRPGNREKYDSRPRDGHRYSRYSPIRRRHSQDRS
RSRRSPDRRDRHEKDSRRRSKPRDFRSNSADKNRSSRDNYRRSRSRSNKSPIKGRSGREE
LKAEISAKESSSEKSEKKSKKEKSSTPETVSQKSAVHKPTESETQKKMSNSPILIDEQAS
DGSEIVQPGSYYSLIPAIIKEKSEESSEIDSSDDEKLRAKLLNLEKQLQKTKKKKHKKKH
KRRSLKSDKEKNDLSASVEVSSTTDIQEVKPKELTPVVDIAEVTSTQKNNQKESSEEGEI
MSDDSQGEIDIEPTDLRHKLKRSKLDNSRTQNLDVCGPALPPHLEKNSRNSESPTKEGPS
LPPHLQKRNRNIGPSIPEDLRKVLADKSEEIQVIKSSDDEDGIGPLPAGAENKWSEAHQR
LEERAIEMKIKSLDGHSLQNTDIKTREQWMLELPEGKAKILGLEARSFRAKEGPDMSDRS
SWTDTPEDKAKKALGIVKEDSSETLQKEAKSRCISNRDEEQEKAVKKHKKKHKREESLLD
IHQKKLKKKKKKDEKDDEKKERRPFSRDLDLQVNRFDEAQKKSIIKKAQDLNNRFSSGEA
KFL