DPGLEAN10419 in OGS1.0

New model in OGS2.0DPOGS204300 
Genomic Positionscaffold333:+ 80812-84545
See gene structure
CDS Length1893
Paired RNAseq reads  461
Single RNAseq reads  1107
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007576 (9e-51)
Best Drosophila hit  ND
Best Human hitE3 ubiquitin-protein ligase RNF168 (1e-19)
Best NR hit (blastp)  PREDICTED: similar to ring finger protein 168 [Apis mellifera] (2e-35)
Best NR hit (blastx)  PREDICTED: similar to ring finger protein 168 [Apis mellifera] (1e-24)
GeneOntology terms







  
GO:0008270 zinc ion binding
GO:0005515 protein binding
GO:0016874 ligase activity
GO:0005694 chromosome
GO:0046872 metal ion binding
GO:0006281 DNA repair
GO:0016568 chromatin modification
GO:0005634 nucleus
GO:0006974 response to DNA damage stimulus
InterPro families

  
IPR001841 Zinc finger, RING-type
IPR018957 Zinc finger, C3HC4 RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Orthology groupMCL40171

Nucleotide sequence:

ATGGCTGCCAAGTCAAAGAGGCGGCTGTCTAAAATTGAAAATAAATTGTTAAAGTTAGAT
AAATTAGAACTCAAAGATGTTATTTGTTCCATTTGTCAGTCAATTTTAATAGAACCAGTG
ACTCTTCCATGCTACCATGACTTTTGTCAAAGTTGTTTTAATGGAAGTATAGAAAATAAT
GCTTTGTGTTGTCCTCTATGTCGATTGAGAATTGGTTCTTGGGTTCGTACAGCGACAAAA
CAAAAGAACATAGTAAATATTAAACTATGGAATTTCATAAAAGATAAATTTGCAACAGAG
GTTGATAAGAAAGTTAAAGGAGAAGATGTAGGACTGTCACCAGAAACAACTGTAACTCGT
TTAAGTGAACCTGGTGAAATTAGATCTGAATATGAAGCTGAATTAAAAAGACTTAGATTA
GAGAGACTGCGTCTTGAACAGAAACATTTCCAAGAGACAGAGATTCTTATTGAAAAACTT
CATAAAGAAGAAGAAGAGGCACACAGAAAATATTTAGAAAACCTTAAACAAGATGAGTTA
TTGGCTATAAAGTTGCAGCAAGAAAGTAAAATAAATATAACTACATCCAATATGATGAAG
AAGAAGAAAACCTTGCCCACCAAACCTAGATTAAAACCTACAACTATTGACTGCTATTTA
ACTAAACCAGTTGAAGCCTCATTTTCTAAGGGAAGCCCCATTTTGACTGACGATAATACA
AGCACTAATGACTCCATACCTATACTACCATCCCACAAAACTAACAGTAGATTATCACCA
GAAATGTTACCTAGCTATGGAAAGCTTCTAAAAAACTTTTTGGACAAGGAACTTAAAACT
GGCACTGTTCTATGGAATAAAGAGAATGGTAAAAGAAAACTAAAAGATAAGGAAGAACAG
CCATCTTGTGGAAAAGAAATAGAAAAGAATAATGAAAAATGTCTTGTGAAAACGAGGAAT
GGTATGCAATCATTAGTTGTTTCCTTGCCATTACCATCAACTGGATTACTGCATCATAAA
TCTTCAATGCCAGAAAATAGAAATATAGAAACCGGGAGTGTTGATTCTATGAGACAAGAA
TTGTGTTATTTTAAACCTATTGAAGGAAATACTCCAACAAGTTTTACACCAATCAAGGAC
CCCTTACGAATACCAAGCATCAAACCTGATAATAACCAAGCTCTGCCTCCAAATAATCCT
TCACCAAGCAGAGCTCAGTTTTTGGAGGGTTTATGTACACTAAGGAATTTGTCTTTGGCT
CACAGGCTGCCATCTGCTTTTGTTATCGCACTAGGAATATTACAAACCAACAAGGAGATA
TCAAAAAATTATGGAGCAACTACAAGATCAAAGGCCAAGAAAAATTCCACGTCAAATCCT
TGGGCGACACCAGCAGTGAACTCTCGACGTACTACATACAATCGAAATAAACAAGTGGAT
ACTATTGAAGGTATAAGTAAATTAAATTCTGAAGTTTCACTAAGGCGGACCAGGTCGATG
GGGAGCATCACTAAGGATGACAATGAAATGACGCCAAAGAAGAAGGTCAAAGTGAAAAAA
TTCAATTCAGAACGAAAACCATATTTAAGGAGTGATTCGAAGCGGATACAGAATAATGAT
TCGTGTAGCCCACCTACAGCAGCAACAATTAATAATAATGTGAAATTAGCTCTTAAAAAT
TTGTCTAGTCCATTGAAAAATTGTGATGTGAAAAGCATATTATGCGAGCAGCTTAGGATT
GAAAAAATAATAGAACAAGAGAAAAGTGACTTGGAGTTAGCACTGAAGATGGACGCCGAG
TTGAATGGAAGACGAACGTTGAGGCGGACTGCAACCAAGCGCCAAGTAACGTTGAACTAC
GCTCTAAGACCTGCTAAGAAACTTAAAGTTTAA

Protein sequence:

MAAKSKRRLSKIENKLLKLDKLELKDVICSICQSILIEPVTLPCYHDFCQSCFNGSIENN
ALCCPLCRLRIGSWVRTATKQKNIVNIKLWNFIKDKFATEVDKKVKGEDVGLSPETTVTR
LSEPGEIRSEYEAELKRLRLERLRLEQKHFQETEILIEKLHKEEEEAHRKYLENLKQDEL
LAIKLQQESKINITTSNMMKKKKTLPTKPRLKPTTIDCYLTKPVEASFSKGSPILTDDNT
STNDSIPILPSHKTNSRLSPEMLPSYGKLLKNFLDKELKTGTVLWNKENGKRKLKDKEEQ
PSCGKEIEKNNEKCLVKTRNGMQSLVVSLPLPSTGLLHHKSSMPENRNIETGSVDSMRQE
LCYFKPIEGNTPTSFTPIKDPLRIPSIKPDNNQALPPNNPSPSRAQFLEGLCTLRNLSLA
HRLPSAFVIALGILQTNKEISKNYGATTRSKAKKNSTSNPWATPAVNSRRTTYNRNKQVD
TIEGISKLNSEVSLRRTRSMGSITKDDNEMTPKKKVKVKKFNSERKPYLRSDSKRIQNND
SCSPPTAATINNNVKLALKNLSSPLKNCDVKSILCEQLRIEKIIEQEKSDLELALKMDAE
LNGRRTLRRTATKRQVTLNYALRPAKKLKV