| New model in OGS2.0 | DPOGS207723 |
|---|---|
| Genomic Position | scaffold886:- 26765-32836 |
| See gene structure | |
| CDS Length | 1818 |
| Paired RNAseq reads | 867 |
| Single RNAseq reads | 1947 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005286 (0.0) |
| Best Drosophila hit | CG3808 (4e-123) |
| Best Human hit | tRNA (uracil-5-)-methyltransferase homolog A (2e-109) |
| Best NR hit (blastp) | RNA m5u methyltransferase [Aedes aegypti] (5e-170) |
| Best NR hit (blastx) | RNA m5u methyltransferase [Aedes aegypti] (4e-164) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0006396 RNA processing GO:0008173 RNA methyltransferase activity GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR010280 (Uracil-5)-methyltransferase IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL13930 |
Nucleotide sequence:
ATGTCAGAAACTGAACTGTTGAAAGACAATAATGAGGTTAACTTAGAAACTGATAATATA
AAAGAGGAATATGCGTATCTGGACCGTGGTGGGTTTTCGTCTGAAAAGTTCAAAGTCGAA
ATTAGAGGCCTCCCCAAATTCTATGGAATAGTGGAACTGAAGAAGCTAATGAATCAGAAA
CTGGGTCTCAATGCCAGTAAAATCAAAAGACCCAAGAATGGCAGTCATTGGTTGTTTGCA
TGTTTCCAAAACGATGAGGACAGATCCAAGGCAATAAGCGCTCTTAATGGATATTCCTGG
AAAGGTAAGACATTGATAGCCGAAGAAGCAAAACCAGCACCAGATCCATTGGTGAAGAAG
AGAAAAAGAGATGAAGATTCAGTAAACATTAAAAAAAAGAAAGAAGACGAGAACAAGAGT
CAAGAAGAAAGATTAAAAGACGCTGTTACGCCATATTGGAATATCCCTTACGAAGAACAG
CTGGCACTAAAAGAGAAAGAAGTGAAGAACCTATTAATGAAATTTGACAATGAAGTATGG
AAAATTGATAAGAACAAACGTAATTCAATAGAATCGAAACGTAAACTGTATAATGGACTA
AGTTTCGAACTGAAGCCCATACAAAGGTCGCCGATCACGGCCGGGTATAGGAATAAATGT
GAATTCACTGTGGGGATCGATGACGACACGGGGAAACCAACGGTCGGCTTCAGACTGGGG
AGCTACGTTACCGGGACAGTCGGCGTGGCGCCAGTCGGCGGCTTAACTCATATATCAGAC
AAAATGAAACAAGCGGTTTTGCTGTTCCAGAATTTTGTCAGGAAGTCCAATATGTCACCG
TTCTCGCCCGCGGACTACTCGGGTTACTGGCGTTACCTCACTGTCAGAGAATCCACTCAT
AATGGAGACATTATGCTGATTGTGGCCATGTATCCACAGGATTTGACAAAAGATAAATTG
GAAGAACTGAAACGAGAATTGATTGAACATTTCAGCTCCGAAGAGGCTCAGGCGTGTGGA
GTGAAGTCTGTGTACTTTGAAGAAATCACTAAAAAGAGGTCAGGTGAGGACGGCTCGAAG
CCGATACATCTAATGGGCGCAACTCATATAGTGGACACAATACTCGGTCTACAGTTCAGA
ATATCTCCAGAGGCGTTCTTTCAGATCAACACGGCAGGTGCTAACATATTATATCAGAGC
GCTATAGACCTCAGCAACGTCAATGAGAAGTCCACGTTGATCGACATCTGCTGCGGGACC
GGTACCATCGGCCTCTGTTTTGCTAAGCATGTAGGGAAAGTCCTTGGTGTAGAGCTCGTG
TCGGAAGCCGTTAAGGATGCGAGGTACAATGCTGAGCTGAACTCTATTGATAACTGTTCG
TTCTTTGCTGGTCGTGCTGAAGATGTGCTGCCCTCTGTACTGGCGAGGGCGACCTCTGAT
GACGTCATCGCGGTCGTCGACCCGCCCAGGGCTGGGCTACACATGCGGGCCGTGACTCAA
CTCCGCAATACTAAGAAGGTGTCCCGCTTGATATACATATCGTGTTCCCCGGCGTCGGCT
ATAAAGAACTTCGTGGATCTTTCCCGACCGTCATCCAAGACGCTGCGAGGGGCGCCCTTC
GTCCCCGTGCAGGCCGTGCCCGTCGACATGTTCCCATACACTAAACACGTTGAATTAGCT
GTTTTATTTGAAAGAGAGGTTCGACCCAGTGATGGTAATGAGGGCGACGTTGACGAGAAA
GAAGTCAAAACAGAAGAAAACGCTGACATTAAGAAAGAAGAAAATATTGTTAGTTTGGAA
GAAAATACACAGACGTGA
Protein sequence:
MSETELLKDNNEVNLETDNIKEEYAYLDRGGFSSEKFKVEIRGLPKFYGIVELKKLMNQK
LGLNASKIKRPKNGSHWLFACFQNDEDRSKAISALNGYSWKGKTLIAEEAKPAPDPLVKK
RKRDEDSVNIKKKKEDENKSQEERLKDAVTPYWNIPYEEQLALKEKEVKNLLMKFDNEVW
KIDKNKRNSIESKRKLYNGLSFELKPIQRSPITAGYRNKCEFTVGIDDDTGKPTVGFRLG
SYVTGTVGVAPVGGLTHISDKMKQAVLLFQNFVRKSNMSPFSPADYSGYWRYLTVRESTH
NGDIMLIVAMYPQDLTKDKLEELKRELIEHFSSEEAQACGVKSVYFEEITKKRSGEDGSK
PIHLMGATHIVDTILGLQFRISPEAFFQINTAGANILYQSAIDLSNVNEKSTLIDICCGT
GTIGLCFAKHVGKVLGVELVSEAVKDARYNAELNSIDNCSFFAGRAEDVLPSVLARATSD
DVIAVVDPPRAGLHMRAVTQLRNTKKVSRLIYISCSPASAIKNFVDLSRPSSKTLRGAPF
VPVQAVPVDMFPYTKHVELAVLFEREVRPSDGNEGDVDEKEVKTEENADIKKEENIVSLE
ENTQT