| New model in OGS2.0 | DPOGS206627 |
|---|---|
| Genomic Position | scaffold346:- 123501-126553 |
| See gene structure | |
| CDS Length | 1461 |
| Paired RNAseq reads | 548 |
| Single RNAseq reads | 1327 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG7146 (2e-95) |
| Best Human hit | vam6/Vps39-like protein (1e-92) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (2e-139) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (3e-136) |
| GeneOntology terms | GO:0005083 small GTPase regulator activity |
| InterPro families | IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 |
| Orthology group | MCL13103 |
Nucleotide sequence:
ATGAGGGAATTCATGAAACTTAACACAGATCTGGAGTTCGTTATAAAGTTGTTCCCCGAA
ATAGACAACAAACCCGGTGCCGAGGTCAAGAAAGCGAAAGGGAAAGATTCTGAGAACCCT
CTTAACGCGTTGATAGAATATCTATTGGAGTATAGATCGAAGATCGGGAAGAATGCTCAG
GAATCGGCTGGCAAGGACGAGCCTAATCAGAAGACCATACAACAGCAGTTAGAGCTGATC
GATACTACGTTATTGAAGTGCTATTTACAGACAAACGACGCTCTAGTGGCGTCGCTGCTG
CGTCTCAATAACTGCCGTCTGGAGGAATCTGAGAGTACGCTTCAAGCGCACGGCAAGCAC
AGCGAGCTGATCATCCTGTACCAGACGAAGGGCCAGCACACGCAAGCGCTTCAGCTGCTG
AGGGCGCAAGCCACCCAGCAGGACTCCAGCCTCAGAGGGTTCCATATGACCAAGAATTAC
CTACAACACCTCGGCGCTGAACATTTGAATCTGATATTTAAATTCTCCGATTGGATATTA
GAGGAACATCCCGAAGAAGGTTTGAAGATCTTCACAGAGGATATAGTCGAGGTGGAAAAC
CTGCCACGGCCCAAAGTATTGGACTTCCTGCTCAGAGAACACGAGCCCCTGGTCATACCG
TACCTGGAGCACGTGATCCACACGTGGAATGACACGCACTCGTTATTCCACGACGCCTTA
ATAAGAATGTATAGAGAGAGGATCACTGATAAGAAGTCCAACGCGACGGAGGAGGAACTG
CAGCACATTAAGTCCAAACTGGTGTCGTTTTTAGAGAAATCCTCCCACTACACTCCAGAG
AGAGTCATATTGCACTTTCCGAACGACAGTTTGTTCGAAGAGAGAGCCATTATTTTAGGA
AAGCTTGGAAGACATGAGCAGGCTCTATCGATATATGTACAGGTTCTTGGTGACGTGGAT
AGAGCCATCAGGTACTGTGAGAACGTCGCTGATAAAAACGCAGATGTCTATGTGATATTG
ATAAGAATACTCATGAACCCGGAACAAAATACTTCATTGACTGGACCGCTGTCCAACGTA
CCGAGACACCCGAACGCCACTGTGCCCGACGTGGAGACGGCTCTAAGCGTGCTGGAGAAA
CACGCGGACAAGATATCACCAATCAAGGCGTTGGCAGTGCTGCCGAGCTCTGTACCGTTG
AGTCGACTTAAGGTGTTCCTGGAGAGCGCTCTGGAAAGTCAGTTAAGTTTGAAGAGACGG
ACGCAAGTGTTGAAGGGATTGTTATATGCTGAACATTTACAGGTACAAGAGTTGAAACAG
TTCCACGAATCCAAGAAGATAGAGATAAACGACTACAAAGTGTGTCCCGTGTGTAAGAAG
AGGTTTGGCAATCAGAGCGCATTCGTGAGATACCCTAATGGGGACATAGTACATTATTCA
TGTAGAACTGATAACCGGTAG
Protein sequence:
MREFMKLNTDLEFVIKLFPEIDNKPGAEVKKAKGKDSENPLNALIEYLLEYRSKIGKNAQ
ESAGKDEPNQKTIQQQLELIDTTLLKCYLQTNDALVASLLRLNNCRLEESESTLQAHGKH
SELIILYQTKGQHTQALQLLRAQATQQDSSLRGFHMTKNYLQHLGAEHLNLIFKFSDWIL
EEHPEEGLKIFTEDIVEVENLPRPKVLDFLLREHEPLVIPYLEHVIHTWNDTHSLFHDAL
IRMYRERITDKKSNATEEELQHIKSKLVSFLEKSSHYTPERVILHFPNDSLFEERAIILG
KLGRHEQALSIYVQVLGDVDRAIRYCENVADKNADVYVILIRILMNPEQNTSLTGPLSNV
PRHPNATVPDVETALSVLEKHADKISPIKALAVLPSSVPLSRLKVFLESALESQLSLKRR
TQVLKGLLYAEHLQVQELKQFHESKKIEINDYKVCPVCKKRFGNQSAFVRYPNGDIVHYS
CRTDNR