| New model in OGS2.0 | DPOGS206631 |
|---|---|
| Genomic Position | scaffold346:- 52494-64843 |
| See gene structure | |
| CDS Length | 4668 |
| Paired RNAseq reads | 924 |
| Single RNAseq reads | 2106 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG11970 (3e-34) |
| Best Human hit | nuclear factor related to kappa-B-binding protein isoform 2 (5e-23) |
| Best NR hit (blastp) | nfrkb, putative [Pediculus humanus corporis] (9e-112) |
| Best NR hit (blastx) | nfrkb, putative [Pediculus humanus corporis] (2e-78) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus |
| InterPro families | ND |
| Orthology group | MCL17327 |
Nucleotide sequence:
ATGGAGGAAAAAGCAGACAGTGAAAACAGTTACAGTGACGATAGTAGCAGTTCTTCCGAT
AGTTCCAGCGGTAGTTCCGACTGCGATGAGGAGGTCACTGAACCAGTACGAATTCTTGGG
CACACCCTAGAGCTACCTCAGGAGTTATGTGAGGACTATTCCATTTTTAAAGAGTTCTTT
TCAATGAAAACTTGGGAAAGTCTAGAAGATAAACACAAGGAGTATCTCAAAGAATATCTT
CCAAAGTTCCCAGAAAATGACGAAGAAGAAAAAGATACAACACTTAAAATGTTATTTAAC
TTTGAGCCATTTCATTTCAAGTCACCTTTGAATAACTTTTTTAGTAATCTTAGGCAAGGT
AATTACAGACCAGATATTGCTAGAATGAGAAAGTTCTTGATGAAAGCCAGAACTAAACAA
CAAAAACACAAGACCAAATCTTACTATGCAAAAATGTTGCCGGAAGTATTAATTGCTCGG
GAGCGATTGCTTGCTACAGCAAAAGGAGGTCCTCCTGGTCCTATTCCTTTTCTTCCATTG
CTTCCACCAAAACCATCAGCTAAAAACAGTTATAAACCTCTATATGTGAGAGCGAGACAA
AGGTATTTTGAAGAGCTAGCTGCTATCTGGAGTGAGGTAGGCGGAGAGGAATCTGAAGAT
GATAATTATCCTGAAGGCCCATCTGAAAATACATTTAAAAAGAGAAAAACAATGCAATCC
AGTCAGAGTGGTGATACAAATGTATCGGGAACGCTTGGTATAACCGACCCCTCACATCCA
GCGTCTTTGGATTGTCTTAAAAATGTCCTCGCAACTCACAGAGCTAGACGACAGTTCAGA
GAAAATCATCCGGAACTTAATACAACCGGCATTACCTTGAATGACATAAAGCAAAGGGTA
GCTTTGATGAATGGTACAAAGAAACTTATGTTTGGTGGTCAAAAGACAGATGCTCCCATA
CAAAAAATAAAGAAAGGTGCTAAAAAAGATGCCAATAAACAGAAGCAAGATGGCAAAGGT
GCAAAGAAAATCAAAGAAGATATTGATAGTATCGAAAATAAACCTCTGTTACCAAACATT
AAAATTAAATGCGAAAGAGAGGAATCGGACTCCGAGAGTTCGTCATTCTTAGATCCAGTG
ACGAGTCCGAAACTTACTAAGAGACTGTCAGAACATGTGGATATAAAACAAGAGGTTCCA
GATATGAGATATCACAATGCAAATTGTCACGATGGTGACATTGAAAGGACAATAAAACAG
GAGCCTCAAGATACTCTACTCTCGATGCAGAATCAATCCAGAGTTGTTCAACCGGTTCCT
ATAAAGTTGGAAGATTTGGATGGAATAGATATGATGGCCTTACCGGTGGAGTTAGCAGAT
GATTCTGGCGAAGTACTCCAAGATACATCAGGAGAGAACGATGAAAGCCTTCTAGAGGGA
GGCGAGGCTCTGACAGAGATAACTCACGCTAACTTCCTTTCTCTGGTGCGAGCCTTATTT
CCGGCGAAGGCAGCCCATAGGGCATCCAAGCAACAGTTACATGCTAGATGCGCAGCTGTC
ATGAGATCTCCAATCGCTCCACTGAATACTTGGTATAATTTGTCGGATGACTGGTGTGCT
GAATTAGATTCAGCACTGGATTTCCTCGCCGGGGAGAGGGGACCCCATCCAGAAGATTTT
GTACCATATTTACAATATATACCTGAAACGGAAATGTATCAATGGATCGGCGCCGGTCGA
GACTGCGACGCCTTGCTGGGTCGACTCTGTGAGAGGTGGAGGCGAGCCGAGCCGCCGAGA
GCACCGCCCGCACCGCCGCCAAGGTATCCGAGTTCGTGGGTAGTTCGACAACCGACGACC
ATGGAGATAGCAGACTTCCGGTCACAAGAGCGGAGGAGATTCGCTTCCGCGTCTAAACCA
TTCACATACGTACAATATGATTATAGGTCGGTCGTGGGTCCTGCGACGGGTCAACGCGCC
GGGTCAGCGGGGTCCGCGCTACTAGCGCCCTCTAGACCTCGCGCCGCCGCGTTTTTGCCG
TTACTAAGGGACGCTCTAGCACGACTGCCTAACGGAGAGGGGTCGAGGAGAGATATCGTC
ATACTACTCAGAATGTCTCAATGGATCGTGCCCTGCAGTGAGCAAGCCCTATCAAGCGCC
GTTGCCACTGCACTCGAGAGACTGTTGGCCGTCAAAAGGGATCCCATAGTCAAGTACGAC
CAAAGAACGGCGGTGTGGACGTATCTGCACAGACACAAGAGCGAAGAGGATTGGAATAAG
AGTGTACGCAGTCGCGCCAGCAAGGCCAACGTTTCCTCACATCAGGTTACTTCGCCTCAA
ACACCCATGGACCTCGACGTGGCTAACGTTGAGGAGGTCGGGGACAATGCCTCTGATAGT
GATGTCGACGTAGACGACACCTCTCCCAGCGCAATGCCACATTTATCATCCGCCCAATTG
TTAATGCAAGCCACACAAGCCACGAAGAAACACATACAGATAAATAAACCGAAAGGCAAA
CTCGTAGCGACACCGCAGAAGCCTCGAGCGGTTCCCAAGCAACCGAAAGTACCATCACTA
GTACAAATGAAGCCGGCTGTCAAACAAATGACTACGAATACGCCAAAAACAGTGCCTAAG
CCGGTGCTCCAAGCTAATTCAAAAACTAGTCTATTGACAAACAAACCAGCTGTGAAGACT
CAGGCTAAGCAGGTTAATACTAAGGTGAAGCAGAGTTTGCCCTCGCCCAAGCAGAGCGGG
AAGCAAGGTGTGATAGTACAGACGGTCAAACAGAACGTGCCGCCGTTAACGAAGCAGAAC
AGCGACACTATGTTGACTCAAGTCAGCCTTCCGTCCATAGTCGTAGCTCCGCAGAGGTCG
CCGCTCATGAAGCAAAAGTCCGCGATAGAAACATCACAAGTCCCGGTTTCATTAAATATT
TCCGTACAACCTTCGTCAACCGCTATCCAAAGCAACGTGGCGCCATCTATACATCAGAAT
AGCGCCAGTCAGTCGGCAAAGTTAGCTCAAGTAACTCGCTCGTTGTTAATAAGACCCTCC
ACGGTGCAGACTTCAACAACCTCTGCCGTAGTTTGTACACCGACGACACAGGTGACACCG
AGCGCCAGACGTGGTATAGTGAGAGTCTTGAGTCCGGCGACGCCTTCCTCGGGGAAATCA
TTAATATCTCCAAGGGCACTCATGCATCAGAGTATACCCACGACGAAAAAGCGCTCAATC
ATACCCGGGACTACATCAGTTACTACCATAGCACAGAGCACATCGAGTCCGACTAACGTC
GTATCTAGTATACCTACAGCTGTAACGTCTTCAGTTACAACGAGAACTGTACAGTTGGCT
GGCGGTCGAACAGTTCAGTTGGCTGCCAATCAAACTGTACATTTACCGAGTGGCCAAGCT
GTACAATTAACTTCAGGACACACGCTTCAACTTTCTTCTCTTCAGTTACCAACACACAGC
GTCAGACTGCCCAGTGGACAAACTGTTCAACTGGCGTCGCCACAAGTAAGGGCTGTATCT
ACAACACAAGTGAAAAACCCAAGTCCGAAAGCACAGACATCGTCACCGAATATCAAAGCT
ATGAACCAATCAGTACAAATTCCAGTATCAACGGTGCAATTAGGCCAGACTGTCCAAATA
GCTGGCCAGACGGTGCAATTGGCTGGACAGAGTGTACAGTTGACTGGACATACAGTCAAA
TTACCGAGCGGCCAAAGCGTACAAGTCGCCAGTCAGAATGTGCTGCCATCACAGAGCGTG
CAATTACCTAGCGGTCAGACTGTACAGTTGGCAAGTGGTATGCAGACTGTACAGTTAGGC
CAAAACGTTCAGTTAAGTGGACAGACAGTGCAAATGCCTAGTCAGAGTGTTCAGTTGGGA
TCTCAGACTGTGCAGATCGGAGGTCAGACTGTTCAGTTGGGCGGAGGTCAGACGGTACAG
TTGCCGAGTGGACAGACTCTACAGTTGTCTGGTGGCCAAACCGTACAGTTGTCCAGTGGC
CAGACCGTACAGTTGTCCAGTGGTCAGACTGTACAGTTGTCTAGTGGCCAGACGTTACAG
TTGGCGAGTGGCCAGACGTTACAGCTGGCTAATCAACAAACCCCGAAATCCATAGCGCAA
GTGGTTAGAACCCAGCCTACTGGTGATAAAACATCTCAACCAATTGTCGCCAAGTTGCTA
ACTAATGCTCAGACCCAGATGATCTCACTGGAGGGTGTCGTGGGGTCTCGCGGCAGAGGA
GGCCGGGGTGGGCGGGGCGTACGAGTCCTAGCGCCGGCGTCCAGGCTAGCTAGACCCCTC
TTATTGACATCAGCTAAACCTCTCCATAACATTATATTACAGCAATCGGACGGCACCATA
CGAGTGACGTCATCGGGAGGGACTTCAACATCACAGACAATAGTTTTAAGTAATATAGGC
TCTCAAACCGTCACCACGCCTACAACCACAGCACCGGTGTTGAAACTGCAGCAGGTGAAT
CCGATACATCAGGTTAAACTTCCACAGGGAATTAAAATTCAACAGGCTGTGACTACGACC
ACAGCGACATCTAGCGGTGTGAGGAGTGTCCTGATGGACGGCCAGCAATTGAAGTTGGTT
GGAGGAAGACACGTGCTCGCCCGCCTCCTAAAACAGGCACCCCCCTAA
Protein sequence:
MEEKADSENSYSDDSSSSSDSSSGSSDCDEEVTEPVRILGHTLELPQELCEDYSIFKEFF
SMKTWESLEDKHKEYLKEYLPKFPENDEEEKDTTLKMLFNFEPFHFKSPLNNFFSNLRQG
NYRPDIARMRKFLMKARTKQQKHKTKSYYAKMLPEVLIARERLLATAKGGPPGPIPFLPL
LPPKPSAKNSYKPLYVRARQRYFEELAAIWSEVGGEESEDDNYPEGPSENTFKKRKTMQS
SQSGDTNVSGTLGITDPSHPASLDCLKNVLATHRARRQFRENHPELNTTGITLNDIKQRV
ALMNGTKKLMFGGQKTDAPIQKIKKGAKKDANKQKQDGKGAKKIKEDIDSIENKPLLPNI
KIKCEREESDSESSSFLDPVTSPKLTKRLSEHVDIKQEVPDMRYHNANCHDGDIERTIKQ
EPQDTLLSMQNQSRVVQPVPIKLEDLDGIDMMALPVELADDSGEVLQDTSGENDESLLEG
GEALTEITHANFLSLVRALFPAKAAHRASKQQLHARCAAVMRSPIAPLNTWYNLSDDWCA
ELDSALDFLAGERGPHPEDFVPYLQYIPETEMYQWIGAGRDCDALLGRLCERWRRAEPPR
APPAPPPRYPSSWVVRQPTTMEIADFRSQERRRFASASKPFTYVQYDYRSVVGPATGQRA
GSAGSALLAPSRPRAAAFLPLLRDALARLPNGEGSRRDIVILLRMSQWIVPCSEQALSSA
VATALERLLAVKRDPIVKYDQRTAVWTYLHRHKSEEDWNKSVRSRASKANVSSHQVTSPQ
TPMDLDVANVEEVGDNASDSDVDVDDTSPSAMPHLSSAQLLMQATQATKKHIQINKPKGK
LVATPQKPRAVPKQPKVPSLVQMKPAVKQMTTNTPKTVPKPVLQANSKTSLLTNKPAVKT
QAKQVNTKVKQSLPSPKQSGKQGVIVQTVKQNVPPLTKQNSDTMLTQVSLPSIVVAPQRS
PLMKQKSAIETSQVPVSLNISVQPSSTAIQSNVAPSIHQNSASQSAKLAQVTRSLLIRPS
TVQTSTTSAVVCTPTTQVTPSARRGIVRVLSPATPSSGKSLISPRALMHQSIPTTKKRSI
IPGTTSVTTIAQSTSSPTNVVSSIPTAVTSSVTTRTVQLAGGRTVQLAANQTVHLPSGQA
VQLTSGHTLQLSSLQLPTHSVRLPSGQTVQLASPQVRAVSTTQVKNPSPKAQTSSPNIKA
MNQSVQIPVSTVQLGQTVQIAGQTVQLAGQSVQLTGHTVKLPSGQSVQVASQNVLPSQSV
QLPSGQTVQLASGMQTVQLGQNVQLSGQTVQMPSQSVQLGSQTVQIGGQTVQLGGGQTVQ
LPSGQTLQLSGGQTVQLSSGQTVQLSSGQTVQLSSGQTLQLASGQTLQLANQQTPKSIAQ
VVRTQPTGDKTSQPIVAKLLTNAQTQMISLEGVVGSRGRGGRGGRGVRVLAPASRLARPL
LLTSAKPLHNIILQQSDGTIRVTSSGGTSTSQTIVLSNIGSQTVTTPTTTAPVLKLQQVN
PIHQVKLPQGIKIQQAVTTTTATSSGVRSVLMDGQQLKLVGGRHVLARLLKQAPP