New model in OGS2.0 | DPOGS200022  |
---|---|
Genomic Position | scaffold1136:- 9348-15976 |
See gene structure | |
CDS Length | 882 |
Paired RNAseq reads   | 822 |
Single RNAseq reads   | 2748 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012441 (1e-122) |
Best Drosophila hit   | CG10026, isoform B (7e-41) |
Best Human hit | alpha-tocopherol transfer protein (8e-26) |
Best NR hit (blastp)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (7e-59) |
Best NR hit (blastx)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (6e-57) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0016918 retinal binding GO:0006810 transport GO:0005622 intracellular GO:0005215 transporter activity |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR008273 Cellular retinaldehyde-binding/triple function, N-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport |
Orthology group | MCL40749 |
Nucleotide sequence:
ATGTATGAATGCTTCCTTGAGATAGCGTTCGAGGCTGAACTGAATACAAAAGAAGACCCT
GAGCTGCTTGAACTAGCACCCGAACTATGCAACGAGGACGCGTCCACCAGGGCCACGGCC
GTCACAAATCTCAGGAATATGATTTTCGAAAGAGCAGAATGCAAACCTCATCGGACAGAT
GACGCGTTCCTCCTGAGGTTTCTCCGAGCGAGAGACTTCATAGTACCGAGAGCGCATAAA
CTCCTAGTCCGCTATTACACGTTCCGGGCGGAATATCCCCATTTGTATAAAGACGTCGAT
CTATGGGGCTTGATGAAGGTCAAAAGTGCTTACGAGGGCTCTATGGTGGACCGACCCGAT
ATAGGAAGACTCTCTATCTTCAGATTTGGAACATGGGATCCTAACGAGTTTCCAGTAGAC
GATCTGATTCGAACAGGGATGGCCATCACTGAAATAGGTATCCGTCAGCCCAAGTTACAG
ATCATGGGCGGAACAGTTATCGTTGATTTGGAAGGAATAACACTCCGACACGCCGCAACC
CTGACTCCGACCATAGCGTATCAGATAGTCTGTTTAATGGGGCTGGTAACACCGACCCGT
ATTAAAAGCGTTCACATCATAAACTACTCCTGGGTTCTCAACACATTCTTCTACCTCTTC
AAGAAGTTCATACCTCAAGAGGCCTGGAGTAAGATTATCTTCCACGGCAGTGACTTGAAA
TCCCTTCAGCAACAAATCGACCCAGAATGCCTTCCAGCCAGATATGGCGGTACGTGTAGA
AATCACGTCCCGATCGGCGTCTGGTTGCAGAAAATCAAAAAATATCGTGACGAACAATTC
GATAGAGAAATGAAAGCGCTCGGATACGTCGTCAAAGAGTGA
Protein sequence:
MYECFLEIAFEAELNTKEDPELLELAPELCNEDASTRATAVTNLRNMIFERAECKPHRTD
DAFLLRFLRARDFIVPRAHKLLVRYYTFRAEYPHLYKDVDLWGLMKVKSAYEGSMVDRPD
IGRLSIFRFGTWDPNEFPVDDLIRTGMAITEIGIRQPKLQIMGGTVIVDLEGITLRHAAT
LTPTIAYQIVCLMGLVTPTRIKSVHIINYSWVLNTFFYLFKKFIPQEAWSKIIFHGSDLK
SLQQQIDPECLPARYGGTCRNHVPIGVWLQKIKKYRDEQFDREMKALGYVVKE