New model in OGS2.0 | DPOGS200034  |
---|---|
Genomic Position | scaffold1136:+ 30397-32938 |
See gene structure | |
CDS Length | 951 |
Paired RNAseq reads   | 315 |
Single RNAseq reads   | 703 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002361 (1e-18) |
Best Drosophila hit   | CG3909 (2e-61) |
Best Human hit | WD repeat-containing protein 61 (1e-53) |
Best NR hit (blastp)   | WD repeat domain 61 [Bombyx mori] (5e-103) |
Best NR hit (blastx)   | WD repeat domain 61 [Bombyx mori] (1e-98) |
GeneOntology terms    | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus |
InterPro families    | IPR020472 G-protein beta WD-40 repeat IPR011046 WD40 repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat |
Orthology group | ND |
Nucleotide sequence:
ATGCCAGCCGCAGCCGCAGCCGCTTATTCTTTATTAAGTAAAAAAGAGGACGCCCACGAT
GATCCAATTTACTGCTGTTCGTGGGCAAATGTCAAAAGTGCAGAGAAAAACGGCCCCTCT
AAGGACTATATTGTGACTGGTGGGTTGGATACACTGATAAAAGTTTGGAAACTGGACAAT
AACAAATTAGATTTACTTCACACTTTACAAGGTCATTGCATGGCCGTGGTATCACTTGCA
GTGAGTCCTGATGGACATACTATTGCATCCGCATCATTAGATTCTACGTTAATTATTTGG
GAGTTGCTTAGCGGTAATAAAGTACATGAGATTCAGACTGGTTCAATAGATGTGTGGAAG
ATTGCTTTCTCCCCAGATGGCAATAAGATCGTCTCGGGGAGTCACACAGGAAAGGTTACA
GTATATGATATAGTCAATAATAGTATTGATAAGATCTTGGATACGAGAGGAAAATTTGCT
TTGTCTGTTGCTTGGAGTCCAAACGGTAAGCACATAGCGACAGGGTCCGTTGTCGGGATG
GTTTACATATTTGATGTTATCCAATGTAAGTTGGTACATACCATCGAAGCTCACACGCAA
ACTATTAGAAGTGTAAAATTTTCACCAAATTCAAATTTGATAGTGACAGCCTCCAACGAC
GGATCTCTCAAGATATTTGATGTTGCTAGCGGTAATCTCGTGAGTTCGCTCACTCTAAGT
TCGTGGGTGGTAAGCGCTTGCTTCTCTCCTGATGGCTCTAGTGTGGCAGCGGCTGATGGT
ACCGTTACCATCGCGACCAAAAACCTGAAACAATTGAAGACCTTCCAGGAACACACTGAT
ATAGTGTGGGACCTCGATTTCAAACCGGACGGCAAAAAGCTACTCTCGGTGGGAAAAGAC
AAAACTATAAATATATATGAAACTCCAGTAGCGAAGCAACAAAACACCTAA
Protein sequence:
MPAAAAAAYSLLSKKEDAHDDPIYCCSWANVKSAEKNGPSKDYIVTGGLDTLIKVWKLDN
NKLDLLHTLQGHCMAVVSLAVSPDGHTIASASLDSTLIIWELLSGNKVHEIQTGSIDVWK
IAFSPDGNKIVSGSHTGKVTVYDIVNNSIDKILDTRGKFALSVAWSPNGKHIATGSVVGM
VYIFDVIQCKLVHTIEAHTQTIRSVKFSPNSNLIVTASNDGSLKIFDVASGNLVSSLTLS
SWVVSACFSPDGSSVAAADGTVTIATKNLKQLKTFQEHTDIVWDLDFKPDGKKLLSVGKD
KTINIYETPVAKQQNT