Genomic Position | scaffold226:+ 6227-7027 |
---|---|
See gene structure | |
CDS Length | 801 |
Paired RNAseq reads   | 190 |
Single RNAseq reads   | 1028 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (4e-124) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-122) |
GeneOntology terms    | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGGTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCGATCTCAGTAGGGGTTCACCAA
GGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATC
CAGGACCAGCCTCCATGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGC
AGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTT
AAACTAAATGTGACGAAGACCGAGTACATGGCTTGCGGAAGCCCGGACTCTTGCACTATC
CATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTG
CATGAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAA
TGGCGTGAGGTCACAGGTGTGGTCTGCGATCGCAGAATACCTACCAAGCTCAAGGGAATA
ATATACAAGAGCATAATCCGACCGGTTCTCTTATATGGAAGCGAATGTTGGCCAACACTG
TCCAGGCACACTCAGGAGCTTCACGTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGC
GTTACGCGGGCTGACCGTATACGTAACACATTTATCCGAAGTAGTCTTGGAGTCCGTGAC
GTAGCGGATAAGCTTCAGAAGAGTCTTCTGAGATGGTATGGCCACGGCCTGAGAACTACG
TCGGAAAAATTTCCCTTGATATGTCGGTCCCTGGAGCAAGACCCCCAGGACGCCCAAGAA
AGCGATGGCTGGACACCGTGA
Protein sequence:
MVRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDES
RLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSIL
HESGGIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTL
SRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRSSLGVRDVADKLQKSLLRWYGHGLRTT
SEKFPLICRSLEQDPQDAQESDGWTP