| New model in OGS2.0 | DPOGS210941 |
|---|---|
| Genomic Position | scaffold226:+ 78195-79238 |
| See gene structure | |
| CDS Length | 1044 |
| Paired RNAseq reads | 128 |
| Single RNAseq reads | 381 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006370 (4e-83) |
| Best Drosophila hit | ND |
| Best Human hit | F-box/LRR-repeat protein 7 (4e-07) |
| Best NR hit (blastp) | PREDICTED: F-box and leucine-rich repeat protein 7 [Oryctolagus cuniculus] (3e-13) |
| Best NR hit (blastx) | PREDICTED: f-box/LRR-repeat protein 13-like [Xenopus (Silurana) tropicalis] (6e-10) |
| GeneOntology terms | GO:0005515 protein binding GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR022364 F-box domain, Skp2-like IPR001810 F-box domain, cyclin-like IPR006553 Leucine-rich repeat, cysteine-containing subtype |
| Orthology group | MCL40065 |
Nucleotide sequence:
ATGACTTTCACTGTTGATGAAGAGGAGGTATTGGACCAGATAAATGTTTTACCAGATGAA
ATATTGATTTATATTTTCAAATGTTTGCCTCTTGACTCTCTACTCAATTGTGAAAAAGTT
TGCAAACGGTGGGAGGAACTAGCACGAGATCCAGCTCTATGGAGAAGGATAGTTATAGTT
TATTCTGGGAAACAAGGCCAAACTGAAGTGAGTGAAAAAAATTTAGAGATTATATTAAGT
CATAAAGAATATATACAATGTTTGAAGATTCAATACATGTATATTTATTCAGTTATAAAA
TTTGTGATAGATCAATGTGAAAACCTTATTAGCCTAGAGTTGGTCATGTGCCGAATTGGC
AAAGATTTCGAATATGACATCCTAAAATGGCCAAATCTGAAGAAATTAAACCTGAGGAAT
TCTATTTTACTTTCAAGCAATATTGATCTTATGGTGCCATTTGAAAATTTTTGCCATCTA
CAATATCTGGCTTTATCAGATTTTGGTTTGTCCTCCTTGAATTGTGATTCTCTACTTGGA
TGTAATTATTTAACTCATATCCTCATTGAAAAAATCAAAGGTTTAGGATTGGAATTTATT
AATAAATTGATATTGTCTAAACAGAAAATAATCAAAACGTTGCATATTTATGGTGGGAAT
TCAATCAATGACTACACTTTAAAACTTTTGTCAAATTGTGTTTCACTAAATGATTTAGCT
ATAGTGAGATGTGAAAATTTAACAGACAAGGGATTTATTTCTTTGACACAATTAAATAAT
CTCCAACACCTGCAGATATGGAATAATAATAATTTTACTGAAACAGGCATATTGCAAGTG
CTGGGTAGTCCTTCTATAAAACAGCTGAAAAGTTTGAGTCTATCCCGAATACAGAATGTG
ACACCTGTATCCGTCGATTTACTATCTGAATACTATAAAAACCTTAAATTTTTAGCCCTG
TACCATTGTCCTAAAATAATTCACACAGATTATGAAAAACAGTTAAAATCAAAATTTAGA
AATATAGATGTTGTACTTTATTGA
Protein sequence:
MTFTVDEEEVLDQINVLPDEILIYIFKCLPLDSLLNCEKVCKRWEELARDPALWRRIVIV
YSGKQGQTEVSEKNLEIILSHKEYIQCLKIQYMYIYSVIKFVIDQCENLISLELVMCRIG
KDFEYDILKWPNLKKLNLRNSILLSSNIDLMVPFENFCHLQYLALSDFGLSSLNCDSLLG
CNYLTHILIEKIKGLGLEFINKLILSKQKIIKTLHIYGGNSINDYTLKLLSNCVSLNDLA
IVRCENLTDKGFISLTQLNNLQHLQIWNNNNFTETGILQVLGSPSIKQLKSLSLSRIQNV
TPVSVDLLSEYYKNLKFLALYHCPKIIHTDYEKQLKSKFRNIDVVLY