| New model in OGS2.0 | DPOGS206692 |
|---|---|
| Genomic Position | scaffold775:+ 4362-10103 |
| See gene structure | |
| CDS Length | 1761 |
| Paired RNAseq reads | 5815 |
| Single RNAseq reads | 14336 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008524 (0.0) |
| Best Drosophila hit | CG9009 (9e-88) |
| Best Human hit | acyl-CoA synthetase family member 2, mitochondrial precursor (2e-35) |
| Best NR hit (blastp) | PREDICTED: similar to AMP dependent coa ligase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AMP dependent coa ligase [Tribolium castaneum] (3e-175) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
| InterPro families | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL19634 |
Nucleotide sequence:
ATGTCTCATTTGAAAATATTACGCGGGAATTTAGCTCATAGAATTCTAAGTAATTTAACT
CCTAAAACAAAATGTAAAAAAATTAGACAATTTCACGTATCTAACCGTAATTCAGCAATT
AAAACAGCGACGGTGGTTGAGCATAATGTTTTAAGTTCGCCGTGGGGTGAAATTACTATA
GGAAACGAGACTTTAACTCAACACGTATTTCAAGATGTCGAAAAATGGTCGGACGCTCCC
TGTGTGACATGCGGCGCATCAGGTCGTTCATACGACTACGGCATGATGAGGATGATGATT
GATAGATGTGCGAACGCTCTCGCCGGACATTTGAAACTCGCGCCGGGCGAGAGAGTAGGT
CTCATACTACCGAATCTACCTGAATTCGTAGTGCTTATACATGGTGCTATGCAGGCTGGC
CTCGTAGTTACATTCGCCAATCCCCTGTATACAGCTGATGAGGTCGGACGCCAATTTTCT
GATTGTGGTGTTAAAGCTATTGCTACAATTGAAATGTTCATGCCGGTTGCTGAAAAAGTC
AGCAAAATGTTAAAAGACTACAAGGGTACCATCTGGGTGGGTGGTGATGACGATAAAGCA
AAAGGTATATACGGTCTGAAGTCCTTACTAATGGCTGATCATAAAGCCGACCTGCCGACA
TTGAATTGTGATGACGTGTGTTTGGTCCCGTACTCCAGCGGCACAACGGGTCTACCGAAA
GGCGTCATGTTAACACACAAGAACTTGGTCTGCAATCTCAAGCAGGTCCAAGTGCCCAAG
ATGATGAAGTATGAAGGAGAGAAAGGTAAAGGAGACGTAATTCTAACTGTTCCGCCGTTT
TTCCATATCTATGGCTTCAACGGGATACTGAACTACAATCTCATCTTAGGGTACCATTTA
GTGTCTATCCCAAAATTCACTCCAGAGGATTATATCAACTGTCTGGTAGAATATCAGCCG
ACTACGTTGTTCGTGGTGCCGTCGTTGCTAGCTTTCTTGGCGACTCATCCCTCTGTGAAG
AAGGAACATCTTCAGTCCGTGGAGACCATTATGGTCGGAGCCGCGCCCACTACTGACAGC
ATGTTAGAGAAGTTCCTCATCAAGTGTGAGAAGAGCAAGGACCAGATCAAGTTGCTTCAA
GGTTATGGTATGACGGAGAGTTCTCCCGTGACGCTGATGACTCCATACTCGTACCCGTAC
AGTAAGGTGGGCTCTGTGGGTCAGCTGGTGCCGTCTACTCAGGCCAGGGTGACGTCACTG
ACTGACGGCACACCCCTCGGACCACACCACAGCGGGGAGCTGCTTCTGAGGGGACCGCAG
GTAATGAAAGGTTACTGGAATAATGAGAAGGCGACGGCAGAAACGGTTGATAGTGAGGGC
TGGCTGCATACAGGAGACGTGGCCTATTACGACGAGGACGGGTACTTCTATATAGTTGAC
AGAACCAAAGAGCTCATTAAAGTTAAAGGCAATCAGGTGTCACCAACAGAAATAGAGAGT
ATAATTATGGAAATACCTGAAATCGCGGATGTTGCGGTCGTGGGAATCCCCGATGCGTTA
GCCGGGGAAGTACCACGAGCCTTCGTCGTTCTGAAACCAGGAAGTAAATTAACAGAAAAA
AATATTTACGATGTCGTAGCAGAGAAACTCACCAAATATAAGCATCTCGAAGGAGGTGTT
GTATTCGTAGAGGCTATTCCAAGAAATGTAGCTGGTAAAATATTGCGTAATGAACTTAAA
GTATTAGGAAGGAAGAAGTGA
Protein sequence:
MSHLKILRGNLAHRILSNLTPKTKCKKIRQFHVSNRNSAIKTATVVEHNVLSSPWGEITI
GNETLTQHVFQDVEKWSDAPCVTCGASGRSYDYGMMRMMIDRCANALAGHLKLAPGERVG
LILPNLPEFVVLIHGAMQAGLVVTFANPLYTADEVGRQFSDCGVKAIATIEMFMPVAEKV
SKMLKDYKGTIWVGGDDDKAKGIYGLKSLLMADHKADLPTLNCDDVCLVPYSSGTTGLPK
GVMLTHKNLVCNLKQVQVPKMMKYEGEKGKGDVILTVPPFFHIYGFNGILNYNLILGYHL
VSIPKFTPEDYINCLVEYQPTTLFVVPSLLAFLATHPSVKKEHLQSVETIMVGAAPTTDS
MLEKFLIKCEKSKDQIKLLQGYGMTESSPVTLMTPYSYPYSKVGSVGQLVPSTQARVTSL
TDGTPLGPHHSGELLLRGPQVMKGYWNNEKATAETVDSEGWLHTGDVAYYDEDGYFYIVD
RTKELIKVKGNQVSPTEIESIIMEIPEIADVAVVGIPDALAGEVPRAFVVLKPGSKLTEK
NIYDVVAEKLTKYKHLEGGVVFVEAIPRNVAGKILRNELKVLGRKK