| New model in OGS2.0 | DPOGS202150 |
|---|---|
| Genomic Position | scaffold2050:- 16134-18127 |
| See gene structure | |
| CDS Length | 519 |
| Paired RNAseq reads | 122 |
| Single RNAseq reads | 698 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009120 (3e-08) |
| Best Drosophila hit | cdep, isoform E (5e-56) |
| Best Human hit | FERM, RhoGEF and pleckstrin domain-containing protein 2 (7e-32) |
| Best NR hit (blastp) | GK13240 [Drosophila willistoni] (2e-71) |
| Best NR hit (blastx) | PREDICTED: similar to Cdep CG31536-PE [Tribolium castaneum] (2e-56) |
| GeneOntology terms | GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0003779 actin binding GO:0008092 cytoskeletal protein binding GO:0035023 regulation of Rho protein signal transduction GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0019898 extrinsic to membrane |
| InterPro families | IPR011993 Pleckstrin homology-type IPR000299 FERM domain IPR018980 FERM, C-terminal PH-like domain IPR014847 FERM adjacent (FA) |
| Orthology group | MCL10395 |
Nucleotide sequence:
ATGCACTCAGCGAAGGATCACGAGGGCGTGCCGTTGAACCTGGCGGTGGCTCACATGGGC
ATCGCCGTGTTTCAACACTGTACGCGCATCAACACCTTCAGCTGGGCCAAGATCCGGAAG
ATATCCTTCAAGCGGAAGAGGTTCCTCATTAAGCTGCATCCCGAGGGATATGGCTACTTC
CGGGACGTAGTGGAATTTTTCTTCGAGAGTCGAAACGAGTGTAAGAATTTTTGGAAGAAA
TGCGTAGAGAACCACGGCTTCTTCAGATGTACCAGCGTACCGCGGCTTCCGCGACACAAG
ACGCGCGTCATGTCAAGAGGATCGTCCTTTAGGTACAGCGGTAAAACACAGAAGCAAATA
GTGGAATTCGTAAGGGATAACTACGTGAAGCGGCAAACATTCCAAAGGTCGGGGTCGTTC
CGCGCGCGCTCGGCGGCCGGCTCGGGCTCGGGGCCGGCCACGCCCGGTCACTGTATATCT
ATATCTATTGTATTCTTTAACATTTGTATCGCATTCTAA
Protein sequence:
MHSAKDHEGVPLNLAVAHMGIAVFQHCTRINTFSWAKIRKISFKRKRFLIKLHPEGYGYF
RDVVEFFFESRNECKNFWKKCVENHGFFRCTSVPRLPRHKTRVMSRGSSFRYSGKTQKQI
VEFVRDNYVKRQTFQRSGSFRARSAAGSGSGPATPGHCISISIVFFNICIAF