| New model in OGS2.0 | DPOGS211606 |
|---|---|
| Genomic Position | scaffold995:- 40728-47823 |
| See gene structure | |
| CDS Length | 1890 |
| Paired RNAseq reads | 5836 |
| Single RNAseq reads | 14252 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008224 (5e-164) |
| Best Drosophila hit | CG42247, isoform D (1e-92) |
| Best Human hit | echinoderm microtubule-associated protein-like 1 isoform a (3e-167) |
| Best NR hit (blastp) | PREDICTED: similar to echinoderm microtubule associated protein like 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to echinoderm microtubule associated protein like 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005874 microtubule |
| InterPro families | IPR011047 Quinonprotein alcohol dehydrogenase-like IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR005108 HELP IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat |
| Orthology group | MCL10941 |
Nucleotide sequence:
ATGAGGATGTTCATCAGGGGTCGCCCGGTGGTCATGTACGGCCCCAGCGACCACGAGAAC
CTGGACCCAGCGAAGGTAGCGCCACCGCCGCAGAGCAAGCTCAAGTTAGAGTGGGTCTAC
GGATACAGAGGCAAGGATTGCAGGAGTAACCTGTACATGTTGCCGACCGGGGAGATGGTT
TACTTCGTGGCGGCGGTGGTGGTGCTGTTCAATGTGGAGGAGCAGTGCCAGAGACATTAC
ACGGGACACACCGACGACGTCAAGAGCATCGCCATACATCCCAACAAGCTGGTCATAGCG
AGTGGCCAGTGCGCGGGACACGACCGACTCGACGCCAGGCCTCACGTCCGCGTATGGAAC
TCCGTGTCCCTGGCGACCCTGGCGGTGGTGGGTGCGGGCAGCCTGGAGCGTGCGGTGAGC
TGCCTCAGCTTCTCCCGGGCTGACGGAGGGAATCTGCTGGCGGTCGTGGACGAGGGCGCG
GACCGAGTGCTGTCCGTGTGGGACTGGCAGAGGGCGGATAGAGGATGTCTGGCCGAGACC
AAGTGTTCCGTGGACACGGTCATAGCGGCGGAGTTCCATCCTCTAGACCGGAACCAGATC
GTGACGTGCGGCAAGGGACACATCGCCTTCTGGACCCTGGACGCCTCCAACGTGCTCTAC
AAACGTATGGGCGTGTTCGACACCAGGGACAAACCCAAATACGTCACATGCCTCGGATTC
AACCATAACGGTGACGTCATATCCGGCGACTCGTCCGGCTCGCTGACGGTGTGGTCCCGC
GGCACGTCCGTAGCGTCCCGCACGGTCCGCGGCGCTCACTCGGGTGGCGTGTTCTCGGTG
TGCGCCCTGAGGGAGGGCGGGCTGCTGTCGGCGGGCGGGAAGGATGGGCGGATCGTGCTC
TTCGACGACGAACTCAACGCGACCGGCACGGAGGCTGTCATCGAGGGTCACTACGGCGGC
GTGCGCGTGGTGTCCGAGGGTCGCGGCCGACTGCTCGTGGGCACCACCAGGAACTGCATC
CTCGTAGGAGACCTGCAGCTGGGCTTCACACCCGCCGTGCTCGGTCACGTGGACGAGGTT
TGGGGCCTGGCGACTCACCCGTGTCTGCCGCAGTTCGTTTCAGCGGGCTGGGACCGCCTT
CTCCAGCTCTGGGACGGGATGAGTCACTCCACCGTGTGGAGTAAAGACATTGATGAGCGT
GCCCAGTGCTGCGCTTGGTCGTCTGACGGAGGTGTAGTGGCGGTCGGCGGCTGTTCCGGC
AGGTGGATGGTGTACGACCCTCAAACGAGGGCGCTCCTCGCGGACCACAGAGACGGGTCG
GAGCCGATCCAGACTATCGTGTATTCCCCCAACAACCAAATGGTGGCGCTCGGAGCTAGA
GATAACTTCATCTACATCTACCAGGTGGACGACCAGGGAGCCAGGTACTCCAGGCTGGGG
AAGTGTGTTGGTCATTCGAGTTTCATAACACACCTGGACTGGTCCGAGGACAGCCAGTAC
CTCAGGAGCAACTCCGGAGACTACGAGCTGCTGTATTGGAACGCGAGCACGTGCCGCCAG
GTGACGTCACCGACTTCAATGCGTGATATCACGTGGGCGAGCAACCACTGCCCGATCACG
TTCACCACCGTGGGCGTGTGGCCAGAGGGCGCCGACGGGACGGATATCAACTCCTGTGAC
AAGTCCAGCGACAACCGCCTGGCGGTGACCGGCGACGACTTCGGCAAAGTGAAACTCTAC
GCGTACCCGGTCACACAACCCAAGAGCGTGTGCGCCACGTACGGCGGCCACTCGTCGCAC
GTGTCGTGCGTGCGCTTCTCGAGTGACGGGACGCGCGTGCTGTCGGCGGGCGGCCGCGAC
GCCGCGCTGATGCAGTGGGCCGTCGAGTGA
Protein sequence:
MRMFIRGRPVVMYGPSDHENLDPAKVAPPPQSKLKLEWVYGYRGKDCRSNLYMLPTGEMV
YFVAAVVVLFNVEEQCQRHYTGHTDDVKSIAIHPNKLVIASGQCAGHDRLDARPHVRVWN
SVSLATLAVVGAGSLERAVSCLSFSRADGGNLLAVVDEGADRVLSVWDWQRADRGCLAET
KCSVDTVIAAEFHPLDRNQIVTCGKGHIAFWTLDASNVLYKRMGVFDTRDKPKYVTCLGF
NHNGDVISGDSSGSLTVWSRGTSVASRTVRGAHSGGVFSVCALREGGLLSAGGKDGRIVL
FDDELNATGTEAVIEGHYGGVRVVSEGRGRLLVGTTRNCILVGDLQLGFTPAVLGHVDEV
WGLATHPCLPQFVSAGWDRLLQLWDGMSHSTVWSKDIDERAQCCAWSSDGGVVAVGGCSG
RWMVYDPQTRALLADHRDGSEPIQTIVYSPNNQMVALGARDNFIYIYQVDDQGARYSRLG
KCVGHSSFITHLDWSEDSQYLRSNSGDYELLYWNASTCRQVTSPTSMRDITWASNHCPIT
FTTVGVWPEGADGTDINSCDKSSDNRLAVTGDDFGKVKLYAYPVTQPKSVCATYGGHSSH
VSCVRFSSDGTRVLSAGGRDAALMQWAVE