New model in OGS2.0 | DPOGS211607  |
---|---|
Genomic Position | scaffold995:- 23742-27986 |
See gene structure | |
CDS Length | 1356 |
Paired RNAseq reads   | 7408 |
Single RNAseq reads   | 17406 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008226 (4e-63) |
Best Drosophila hit   | eIF5, isoform G (4e-112) |
Best Human hit | eukaryotic translation initiation factor 5 (5e-86) |
Best NR hit (blastp)   | eukaryotic translation initiation factor 5 [Bombyx mori] (0.0) |
Best NR hit (blastx)   | eukaryotic translation initiation factor 5 [Bombyx mori] (3e-173) |
GeneOntology terms    | GO:0006413 translational initiation GO:0005829 cytosol GO:0003743 translation initiation factor activity |
InterPro families    | IPR016189 Translation initiation factor IF2/IF5, N-terminal IPR016024 Armadillo-type fold IPR016190 Translation initiation factor IF2/IF5, zinc-binding IPR016021 MIF4-like, type 1/2/3 IPR003307 eIF4-gamma/eIF5/eIF2-epsilon IPR002735 Translation initiation factor IF2/IF5 |
Orthology group | MCL13361 |
Nucleotide sequence:
ATGGGGTCGGTGAACGTGAACCGCAACGTCGCGGACGCCTTCTACCGGTACAAGATGCCG
CGCATCTGCGCCAAGGTCGAGGGGAAGGGGAACGGCATCAAGACGGTCATCGTCAACATG
CCCGAGGTGGCCAAGGCGCTCGGCAGACCGGCGACCTATCCGACCAAGTACTTCGGCTGC
GAGCTGGGCGCCCAGACTCAGTTCGACTTCAAAAACGAGCGCTTCATAGTGAACGGCAGC
CACGACTCCGCCAAGCTACAGGATCTGCTGGACGGCTTCATCCGCAAGTTCGTGCTGTGC
CCGGAGTGTGACAACCCTGAGACGGAGCTGATCGTGTCCACCAAGCGGAACACCATCTCC
CAGGGCTGCAAGGCGTGCGGTTACCACGGCACCCTGGACTTCAACCACAAGCTGAACACC
TTCATCCTCAAGAACCCGCCCGCCGCCGACCCGGCCATGCAGGGCTCGTCTCTGACGGAG
GGCAATCGCGGCAAGAGATCCAAGAGGAGCGGGCCGGCTAACGGGAACCACGACGGGGAA
CAACACGACGCTAAGAACGAGGGAGAAGCTCCCGTCACGCCCACAGCTCCTCAACCGAAG
AGCAAGAAGGAAAAGAAGAAGGCCGAGGACGACGACGACGACGGGAACTGGACCGTGGAC
GTCAGCGAGGAGGCTGTGAGGGCCAGGATGCAAGATCTGACCGAAGGCGCCAAGAGCATG
ACGTTGTCGGAGGACAGCGAGAAAAACGAGAAGCAGAGGATGGACCTGTTCTACGCGTTC
CTCAAACAGCGAGCTGACGCCGGAGACGTGGAGGGCACGCGGGCCATCAGCGACATCCTG
CACGAGGTGGAGAGGCTGGACGTGAAGTCGAAGGCATTGCTGGTCGCTTTCGAGGTGCTG
GTGGGCGCCAACACGCTGGCGGCGGACGTGAAGAAGCACCGCATGCTGCTGATACGCCTG
GCGCGCGCCGACGCCAAGGCTCCGAGGGCGGCGCTCCACGCGCTCACCGCCCTGGCCCAC
ACCAGCCCCGCCCTGCTGCAGCGGGTGCCCGCCGTGCTGAAGCTGCTGTACGACCTGGAC
GTGGTCGAGGAGAAGACCATACTGGAGTGGGCCGCGAAGCCCTCCAAGAAATACGCGCCG
CGGGAGACCGTGGCCGACGTGGTGAGGCGTGCGCAACCCTTCATTGACTGGCTGCAGCAG
GCCGACGAGGAGGACTCCAGCTCGCAGGAGGAGGACATTGAGATCCAGTATGACGACCGC
GCTAAGGCGACCCCCATCAAGGCGGTGGTGGCGCCCTCTGCTCCGCGACAGAAGCCCGAG
GAAGACGACATCGACGTCGACATAGACGCCATATAG
Protein sequence:
MGSVNVNRNVADAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPATYPTKYFGC
ELGAQTQFDFKNERFIVNGSHDSAKLQDLLDGFIRKFVLCPECDNPETELIVSTKRNTIS
QGCKACGYHGTLDFNHKLNTFILKNPPAADPAMQGSSLTEGNRGKRSKRSGPANGNHDGE
QHDAKNEGEAPVTPTAPQPKSKKEKKKAEDDDDDGNWTVDVSEEAVRARMQDLTEGAKSM
TLSEDSEKNEKQRMDLFYAFLKQRADAGDVEGTRAISDILHEVERLDVKSKALLVAFEVL
VGANTLAADVKKHRMLLIRLARADAKAPRAALHALTALAHTSPALLQRVPAVLKLLYDLD
VVEEKTILEWAAKPSKKYAPRETVADVVRRAQPFIDWLQQADEEDSSSQEEDIEIQYDDR
AKATPIKAVVAPSAPRQKPEEDDIDVDIDAI