| New model in OGS2.0 | DPOGS203571 |
|---|---|
| Genomic Position | scaffold41:- 31002-88702 |
| See gene structure | |
| CDS Length | 558 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 23 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008566 (5e-29) |
| Best Drosophila hit | Vsx2 (8e-20) |
| Best Human hit | visual system homeobox 1 isoform a (3e-14) |
| Best NR hit (blastp) | AGAP011143-PA [Anopheles gambiae str. PEST] (4e-24) |
| Best NR hit (blastx) | AGAP011143-PA [Anopheles gambiae str. PEST] (4e-23) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding GO:0007275 multicellular organismal development |
| InterPro families | IPR009057 Homeodomain-like IPR012287 Homeodomain-related IPR001356 Homeobox |
| Orthology group | MCL19605 |
Nucleotide sequence:
ATGAATGACGGCTTCACCACATGCCACGAGGAAGGAGTATCATCCATAGAAGCAGCGAAA
GACTTCACGGTCGACGGTCTGACGGGCTATAACGGGAAGAAGAAGAAGAAAAAACGTAGA
CACAGCAGGACGATCTTCACTTCTTATCAGCTGGATGAACTTGAGAAGGCCTTTAAGGAT
GCTCATTACCCAGATGTATATGCCCGAGAGATGTTGTCACTCAAGACAGATCTCCCTGAA
GACAGGATACAGTCTGATGAGGAAACGTCGGTCAGCCGGGTAATCCGTGTGGAAATCGGC
CCTCAATATCCGGATAATATCCCGCAAATAGAGCGAGCAAACGTCGGCACTCGGCTCGGT
CGCAAACAGGCGCTCGACTCGTCGGTAAATAACGAGGCGGCAGTAATCGATTTACGTGTA
CATTATCTCCCGCGGAGAGATTTGTGTTTTGTTCTGTTCGTCCTCCGACCGCCGACGTGT
CTACGTTTTCTTGGAACTCGCTACCGAACTCGGCACATTTGTTTCAAGAAGCGTTCGGCG
TCCGCCGGCCCCGTCTAA
Protein sequence:
MNDGFTTCHEEGVSSIEAAKDFTVDGLTGYNGKKKKKKRRHSRTIFTSYQLDELEKAFKD
AHYPDVYAREMLSLKTDLPEDRIQSDEETSVSRVIRVEIGPQYPDNIPQIERANVGTRLG
RKQALDSSVNNEAAVIDLRVHYLPRRDLCFVLFVLRPPTCLRFLGTRYRTRHICFKKRSA
SAGPV