New model in OGS2.0 | DPOGS203504  |
---|---|
Genomic Position | scaffold41:+ 154513-163185 |
See gene structure | |
CDS Length | 5838 |
Paired RNAseq reads   | 1181 |
Single RNAseq reads   | 3007 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008561 (0.0) |
Best Drosophila hit   | stoned B, isoform F (0.0) |
Best Human hit | stonin-2 (3e-63) |
Best NR hit (blastp)   | PREDICTED: similar to clathrin coat assembly protein, partial [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to clathrin coat assembly protein, partial [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0048488 synaptic vesicle endocytosis GO:0030135 coated vesicle GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0006901 vesicle coating GO:0016183 synaptic vesicle coating GO:0048489 synaptic vesicle transport GO:0016021 integral to membrane GO:0005515 protein binding GO:0030139 endocytic vesicle GO:0005886 plasma membrane GO:0007268 synaptic transmission GO:0006886 intracellular protein transport GO:0030131 clathrin adaptor complex |
InterPro families    | IPR001392 Clathrin adaptor, mu subunit IPR008968 Clathrin adaptor, mu subunit, C-terminal IPR012320 Stonin homology |
Orthology group | MCL16527 |
Nucleotide sequence:
ATGCTAAAGCTACCCAAAGGCCTTAAAAAGAAGAAAAAAGGAAAAAAATCTAAACGTAAA
GGTGAAGAAGAGCTTTTCACAGAAGAAGAGCTTGAAAAATATAGAAGAGAACATCAGAAG
CAGAAAGAAAGTAGCGATGAAACTGTAAAAGAAAATGAGGAATGGTCTAAATTCAAAGAC
TTGACTACTGGGGTCGACTCTGTTCTTAAGAAAACCCAAGGGGATCTTGATCGAATCAAG
TCCACTTCATTTTTTCAACGAATACCAGCAGGTACTAAAGAGCGAGAGCCGGTTGAGAAG
GAAGAGCCGAAGCGACCCGTGGTTGAAATAACTGAAGCTGACTTTCCACAGTTAGCGGCA
GCTGCAGCAGCAGCCACCGTAGACAGTGAATACGACTACGGGGTCACTGATGAGGAATCC
GACGACGAGGACGAACAAGACGACATATTTGACACATCTTATGTAGATGCTGTTGAGCGT
GGAGAAGTAAAACTTGCCTACGTTCCTGATTCACCAGAAGAATTTCAGGATGACGATATT
TTTGATACATCACATGTTGATGCTTTAATAAAAGGCCAGGAATCAAAAACTCCTAAAGGT
AAAAAAGGCCTGGACATTGGTGTTGCTGTCGAAGTCTTAACTGGACGAATAGATAATCTT
ACTATAACTTCGACGAAGAGATCTAAAAGAGTTATACCTGGAGATTTACTTTTAGAAAGT
GTAGATAAAGATAATTTACCAGCTGTGACATCAACTGTTGTCGAACCTGAAGAAAAAAGC
ATTCTAGATATTGATGCTGATATTCCAATAACAAGTCCTATAGATCTCAGTGTATCTTTG
CACACTACATTGATTCAACAAAATAAAAGTATTAGCCGAGAAGAATTATTTGCTTCTTGT
GCTGATGATAAAAATAATACCGAAGGAGAAACAGAAGTTGATGAATTTACTTTATTAGCT
GCGGAATCTTTAGAAGTAAAAACGGTTGTTAAAAAAATCGAAGAAAGTGAAATTAAAGTA
GAACCTGTTTTACAAGAATCTTGGTCAGCGTTTGAAGCAGACAAAAGTGATACAGTTTTT
GCAGAAGGAATAGTTGAAGATCAGCTCGACGTTGATCCTTATGTTGATGAACACGACCCA
TTTGATACTAGTTTTGCCGATGCAATAATTCCAGGTGGAACTTTGCAAGAACAAGAACAG
AAATCTGCGTTATTAGAAGACGACGATGATTTTGATCCTCGCGCAGACGAGGTTAAGGTT
ATATTAAATAACAGAAGAAAATCATCTGTTCGTATTCATATAACTAATCCTTCCGGTCTA
CGAGAATCAATAACATCTGATGATATTGTAGATAGTGGTGATAGTCAAATCCAACGAGAC
CTTCTAGGAGGAAGCACAACTGATTTGACACAATTAGGTGATTCTCTTTTAGAACCAGTA
GATATAAATGATAGTGAAATCGATCCTTTTGACACTACTATAGTAGACAAGATTGTTGCA
CCTGGTAAAGTTGAATTAAAACTTTTAGAGGAAGAACTTATTGGAGTTGTTTCGTCTGCA
CCAATTTATAGGGTACCTAGTGACCCCGATTTTGATCCAAGGGCAGACGAACCTAAAAAA
ACTGAGAGAAGAGCTTCACGCCCCGAGAACCTTACAGTAAGTAAAAGTGTAGGTTTCAGT
GTGGATGGCGTAACAATTTCAGAATTAGATTCTCAGGGTAAATCTAAGCCTGTGAAACCT
GTGACACCTTACTACAATCGGGAACTCTCTATAACAGAAGACATTAACGAAGACTCGGAA
GTCGCTGACAAACCTTTAAAAACTTTGACTCGAACGCGTTCAGAAGAGGAATTCACTTCA
AGTATTTCTCATCAAACTAAAAGAAGACATTCTGAATTTCCTCAGCAAAATAAAATCGCT
TATAAAGCAAGCGATCTCTTACACGATACCGTAAACGATATTGAAGTAAAGGTGCTTACA
CCCACTGAAACGAGAGTTCCACAAAAAACCTTATCAAAGAAAGATATTGATCCTTTTGAT
ACTTCATTTGCGATTAATATTGAACCAAGCAAAACAGAATTAAAGCTATTAGCTAAGGAA
TTTTCTTGCGAAAAGTCATCAGGTGTCGAAGGAGAAGGTGAACCTGATTTATTAGAACCT
TCTGACGATATTTTTCAAATCAAAGCACTTACCCCCGAACCATCGGATATTGCGCGAATT
CCTGAAGAAGAATTTGATCCATTTGATACTTCGTTTGCAAACGATTTAAACCCAGGAAGG
ACTGAGATTAATATAAACGAGCCGGCGGCTCCAGTGACCACCGAAGTATTGAATCCATTT
ATAATGACTGATTCTGAGACCTCAAGTTATACACCAGGTGATAACCCTTTCGCTACCAGT
AATCCTTTCTCAGACTTTGGCGCAAGCTATGAACCAGCTGTCGGTGATACAGTGCCGATA
GACATTTTTGGAGGCCCTGAAGAAGCCAGCATTGGAGCTCAACAATACGATAAAATTAGA
TCTATCGATGTATTTGGAAACCAACAAATTGATAGTGAACGTATAGTTAAACCAACTGAG
CTCGAACTTGTGACCACTATGGTTGATTGCGATTATTCCACTGAAACAAAAGCAGATGAA
GCACAATCTGCTACGCATCCACTACCACCTGAAACACAAAATTTAATTTTAACAGTTACA
GGACAAATGGAATTTACAAGTTCACACTTACTGGATCGTATACCCCCAACAAGAACACCA
AGTCCTGTATCAGTGAGAGATATTCACTCCCCAAGTCCGACCCCTGAGCCATATTTGTTT
GAAGATAACACAAGCACAACGCAAACGGTCAATAAACCTACACGTCCTCCACCTGTACGG
CCTCCTCGTCCTGCACCGCCTCCCAGACCGCAACCACCGGTTCAAGCACCAGTTCAAACA
GCTCCAGATGACATCAATCTTTTTGATGCTCCTGTACCTACCACCATAAAACCAACAAAA
GAAGCTATATTAAGTTTATATTCAGCACCTAAAAAGGAAGAAAAACAAATTGATTTTTTA
AGTGATGATATCCTCGAATTATCAAACGAAACGGACATGCAACCTACGGAAGGTTTTGGA
CAACCTGCCAAAAATTCTCAAACTTCAGAAGCGACTCACTTACTTTTCAATGATTCAGTT
TCATCTATCTCAGATAATATAAATCATTCGGAAGTTCAAAAGTCTTTATTCGAATCGGAC
AACATAAATCCTAACGAAGACACCAATGTTGCAATGGATTGTACAGACCTATCGGAAAAG
AATGTAAACGTCAGTGCTACAAATACATCCCCATTTGCTGACATGTCGGACACAAATTTT
CAAACACAACAAGGTGAAAATGAGAAGAATCCTTTTGAGTTATCGGGAGTTATTGACAAT
AATTCTCCATTTGCTACTTCTGATCTTATGAATTCTGAAATACTGACTGAGCCTGCAGAT
ATTGTGATGACTTCTAGTCATAAACAACTTATAAATGACGAGTTACACATTGTAACTACA
ACTGAGCCCAAAAAGGCACCAGAACAACAGATGAATGAGGTAAATGTCTTTGCCGCTATG
GCAACAGACGATTTTGTTGAAAAATCCAATATATTTGCCTCAGTACCTCAAGAGACAACA
TCTCACAATGATGAAAATATCTCATCCAGCAACACAAACTGGGGCACAACTGAGAAGATG
GAAACCGCTTTTCCTGAAACTCAAGACGACTTTGACGCATTTTCAGCTAAATTTGAATGC
GCTGGAGGAAATCAAATGAACACAGACGCATGGGGCGATGACAGTAGTGCTGACCTTGCT
CCAGGCGGTTTCGAAGCCGAAGCATTTGATTCGTTTTTAAGTATGGACGCTCCACCGGCT
CCAGCGGCTACCCCAAGATTAGATCACCAGGAATCTAAAGATTCTATGGACGATACATTT
TCGGTATTTATAAGACCCAAAGAAGGTGAATTCAGTACAAACGAAGCTTCGGTGCCCGTT
CTGGCTCCACCGCCAAGACCCCAGGTACTCCCAGAATCACCACGAGCAAATCCCTTCGAT
AAGAATGAAACTATAGGAATGCAACAAAGAATCGATTTTGATGAAGCAGCGCAGAAACCT
GATGGTAGCGGTGCGGAGACACCTCCGACACCGCTCTTTGACGAGGACGTTTCGGTTCCG
CTAGAGGACTTCCCTCGTACCAAGTATGCGGGACCGGGTTGGGAGATGCATCTTCGGCAA
CCGAACAAGAAAAAGATCACAGGACAAAGATTCTGGAAAAAAGTCTTCGTCCGCCTTGCA
AACCCGGGTGACAGTCCCGTGGTGCAACTGTTGAACTCAGCCACAGACAAGCAACCGCTG
CAAGAACTGCCACTGCAGGCGTGCTACTCGGTGTCAGAAGTAGGCGCACAGCAATTTGAT
CAGTTCGGAAAAATCTTCACTGTCAAGCTACAGTATGTCTTCTACAAGGAGCGTCCGGGA
GTGCGACCAGGCCAAGTAACGAAAGCGGAGCGTATCACAAATAAGCTGTCTCAGTTCGCT
GCGTACGCCATCCAGGGAGACTACCAAGGTGTCAAAGAGTTCGGCAGCGATCTCCGCAAG
CTGGGGCTGCCTGTAGAGCATGCGCCGCAGGTTACACAACTGTTCAAGTTGGGATCACTG
GACTACGAGGCCGTGAAGCAATTTTCGTGCTGCGTGGAGGAGGCCTTATTCCGCTTGTCT
GCCCATCGAGACCGCGCCCTTACCTACAAGATGGAGGAGGTACAGCTGACGGCGGTGGAC
GAACTTTACGTGGAGCAAGACGCGGAGGGTGCCGTGCTAAAGCAAATAGCTCGAGTGCGA
CTCTTCTTCCTGGGTTTCCTTAGCGGTATGCCAGACATCGAGCTGGGGGTCAATGACTTG
AGACGACAAGGCAAAGAGGTTGTAGGCCGCCATGACATCATCCCCGTAGCAACCGAGGAG
TGGATCCGTGTGGAGGACGTGGAATTCCATGCGTGCGTGCAGCCGCAGCAATTCCAAGAT
ACGCAGATCATCAAGTTCAAGCCGCCGGACGCGTGCTACATCGAGCTGATGAGGTTTCGG
GTGCGACCTCCTAAAAACCGCGAGCTGCCGCTTCAGCTCAAGGCCGTCTGGTGCGTCACC
GGAAACAAGGTGGAACTGCGCGCGGACGTACTGGTGCCAGGGTTCGCGTCGCGCGCTCTC
GGTCAAGTTCCATGCGAGGACGTCGCTGCACGCTTTCCCATTCCCGAGTGCTGGATCTAT
CTGTTCCGAGTAGAAAAACATTTCCGATACGGTTCTGTGAAGTCCGCCCACAGACGTACT
GGTAAGATCAAAGGCATTGAGCGTTTCCTCGGCGCTGTGGACACACCTCAGGAATCCCTC
ATCGAGGTGACTTCGGGGCAGGCCAAGTATGAACACCAGCACCGTGCCATCGTGTGGCGT
ATGCCTCGCTTGCCCAAAGAAGGACAAGGCGCATACACGACCCATAATCTTGTGTGTCGT
ATGGCTTTAACATCGTACGATCAAATTCCGGCCGAACTGGCACGTTGGGCTTTCGTCGAG
TTCACGATGCCCGCGACTCAGGTCAGCCACATGGTGGTACGATCCGTGTCGCTCCAGGAC
CACGACGGGGACCCTCCCGAGAAGTACGTGCGTTACCTCGCGCGACACGAGTACAAGGTG
GCCATCGAGCGTACGACGGGTGCCCCGACGGCCGCATATGCGCTGGCGGCCGCCAAGGAT
ACCGCCCCCGCCTCCCCGGCCGCAGCCGCAGACCCCGCTCCGCCACAGGAACCCTCCTCG
GACTCCGACTCCGACTAG
Protein sequence:
MLKLPKGLKKKKKGKKSKRKGEEELFTEEELEKYRREHQKQKESSDETVKENEEWSKFKD
LTTGVDSVLKKTQGDLDRIKSTSFFQRIPAGTKEREPVEKEEPKRPVVEITEADFPQLAA
AAAAATVDSEYDYGVTDEESDDEDEQDDIFDTSYVDAVERGEVKLAYVPDSPEEFQDDDI
FDTSHVDALIKGQESKTPKGKKGLDIGVAVEVLTGRIDNLTITSTKRSKRVIPGDLLLES
VDKDNLPAVTSTVVEPEEKSILDIDADIPITSPIDLSVSLHTTLIQQNKSISREELFASC
ADDKNNTEGETEVDEFTLLAAESLEVKTVVKKIEESEIKVEPVLQESWSAFEADKSDTVF
AEGIVEDQLDVDPYVDEHDPFDTSFADAIIPGGTLQEQEQKSALLEDDDDFDPRADEVKV
ILNNRRKSSVRIHITNPSGLRESITSDDIVDSGDSQIQRDLLGGSTTDLTQLGDSLLEPV
DINDSEIDPFDTTIVDKIVAPGKVELKLLEEELIGVVSSAPIYRVPSDPDFDPRADEPKK
TERRASRPENLTVSKSVGFSVDGVTISELDSQGKSKPVKPVTPYYNRELSITEDINEDSE
VADKPLKTLTRTRSEEEFTSSISHQTKRRHSEFPQQNKIAYKASDLLHDTVNDIEVKVLT
PTETRVPQKTLSKKDIDPFDTSFAINIEPSKTELKLLAKEFSCEKSSGVEGEGEPDLLEP
SDDIFQIKALTPEPSDIARIPEEEFDPFDTSFANDLNPGRTEININEPAAPVTTEVLNPF
IMTDSETSSYTPGDNPFATSNPFSDFGASYEPAVGDTVPIDIFGGPEEASIGAQQYDKIR
SIDVFGNQQIDSERIVKPTELELVTTMVDCDYSTETKADEAQSATHPLPPETQNLILTVT
GQMEFTSSHLLDRIPPTRTPSPVSVRDIHSPSPTPEPYLFEDNTSTTQTVNKPTRPPPVR
PPRPAPPPRPQPPVQAPVQTAPDDINLFDAPVPTTIKPTKEAILSLYSAPKKEEKQIDFL
SDDILELSNETDMQPTEGFGQPAKNSQTSEATHLLFNDSVSSISDNINHSEVQKSLFESD
NINPNEDTNVAMDCTDLSEKNVNVSATNTSPFADMSDTNFQTQQGENEKNPFELSGVIDN
NSPFATSDLMNSEILTEPADIVMTSSHKQLINDELHIVTTTEPKKAPEQQMNEVNVFAAM
ATDDFVEKSNIFASVPQETTSHNDENISSSNTNWGTTEKMETAFPETQDDFDAFSAKFEC
AGGNQMNTDAWGDDSSADLAPGGFEAEAFDSFLSMDAPPAPAATPRLDHQESKDSMDDTF
SVFIRPKEGEFSTNEASVPVLAPPPRPQVLPESPRANPFDKNETIGMQQRIDFDEAAQKP
DGSGAETPPTPLFDEDVSVPLEDFPRTKYAGPGWEMHLRQPNKKKITGQRFWKKVFVRLA
NPGDSPVVQLLNSATDKQPLQELPLQACYSVSEVGAQQFDQFGKIFTVKLQYVFYKERPG
VRPGQVTKAERITNKLSQFAAYAIQGDYQGVKEFGSDLRKLGLPVEHAPQVTQLFKLGSL
DYEAVKQFSCCVEEALFRLSAHRDRALTYKMEEVQLTAVDELYVEQDAEGAVLKQIARVR
LFFLGFLSGMPDIELGVNDLRRQGKEVVGRHDIIPVATEEWIRVEDVEFHACVQPQQFQD
TQIIKFKPPDACYIELMRFRVRPPKNRELPLQLKAVWCVTGNKVELRADVLVPGFASRAL
GQVPCEDVAARFPIPECWIYLFRVEKHFRYGSVKSAHRRTGKIKGIERFLGAVDTPQESL
IEVTSGQAKYEHQHRAIVWRMPRLPKEGQGAYTTHNLVCRMALTSYDQIPAELARWAFVE
FTMPATQVSHMVVRSVSLQDHDGDPPEKYVRYLARHEYKVAIERTTGAPTAAYALAAAKD
TAPASPAAAADPAPPQEPSSDSDSD