New model in OGS2.0 | DPOGS203745  |
---|---|
Genomic Position | scaffold1487:+ 11857-13731 |
See gene structure | |
CDS Length | 567 |
Paired RNAseq reads   | 109 |
Single RNAseq reads   | 363 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011491 (2e-56) |
Best Drosophila hit   | CG10425 (3e-26) |
Best Human hit | 3-ketodihydrosphingosine reductase precursor (1e-32) |
Best NR hit (blastp)   | AGAP003984-PA [Anopheles gambiae str. PEST] (1e-46) |
Best NR hit (blastx)   | short-chain dehydrogenase [Aedes aegypti] (1e-38) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0008152 metabolic process GO:0008270 zinc ion binding GO:0003824 catalytic activity GO:0005515 protein binding GO:0055114 oxidation reduction GO:0005575 cellular_component GO:0046872 metal ion binding |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
Orthology group | MCL14835 |
Nucleotide sequence:
ATGATAGATCTCAACTATTTTGGCACTGCTTATCCTACTAGATGTGTTCTACCTGGTATG
AAGAAACGGGATGTGGGGATCATAATTTTTGTTTCAACCGAAGCAGCTTTACTAGGTATA
TATGGCTACAGTGCTTATGGTGCAGCTAAATGGGCCGTCCGTGGTTTAGCAGAATCAGTA
TTCATGGAGCTTACGGGAACAAATGTGAGATTGACCCTTGCATTTCCACCTGATACTGAC
ACTCCTGGATTCGAAAAGGAGGAGTTGACTAAACCGAAGGAGACCAAATTAATATCTGGT
TCTGGCGGATTACATACAGCTGAGGATGTCGGCAAGAAAATGATTCAAGATGCACTGAAC
GGCAAGATATATTCTGTGTTCGGCTTCAGCGGTCATTTGCTGTCTACCCTCTACTGTGCT
ACTATAGATGGGCCGTTTCAAATTATTGTACAAATACTTTCATTGGGTTTACTACGGGCT
GTGATGGTTGTACCTCAGCTGTCGTTCCAGAAAATAGTCAAGGATGGTCTCAAAGAGAAG
TGTTTAGAAAATAGTAAGGATAAATAG
Protein sequence:
MIDLNYFGTAYPTRCVLPGMKKRDVGIIIFVSTEAALLGIYGYSAYGAAKWAVRGLAESV
FMELTGTNVRLTLAFPPDTDTPGFEKEELTKPKETKLISGSGGLHTAEDVGKKMIQDALN
GKIYSVFGFSGHLLSTLYCATIDGPFQIIVQILSLGLLRAVMVVPQLSFQKIVKDGLKEK
CLENSKDK