New model in OGS2.0 | DPOGS204388  |
---|---|
Genomic Position | scaffold131:- 161001-168354 |
See gene structure | |
CDS Length | 1875 |
Paired RNAseq reads   | 283 |
Single RNAseq reads   | 709 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013003 (6e-142) |
Best Drosophila hit   | CG6142 (1e-165) |
Best Human hit | choline dehydrogenase, mitochondrial precursor (4e-69) |
Best NR hit (blastp)   | GL21830 [Drosophila persimilis] (1e-180) |
Best NR hit (blastx)   | GL21830 [Drosophila persimilis] (2e-177) |
GeneOntology terms    | GO:0006066 alcohol metabolic process GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0050660 FAD binding |
InterPro families    | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
Orthology group | MCL18109 |
Nucleotide sequence:
ATGAAGCTATTAATTTTTGTTTATATAATTCTGAAAACTACGGAAGCGTCTACGGAGAGA
TATAATTTCTTAGATTTTTGGACGAATCTATTCCGACCGATACCACGTTTGGCAAAGGAG
GGATTTGTACCCGATTATACACCGAAAGATGGCCAGGAATATGATTTCATTATTATAGGA
GCCGGATCTGCGGGATGTGTATTAGCTAATAGACTATCGGAGATATCCGAATGGAAAGTA
TTGATATTAGAGGCTGGGGGAAATGAGAATTATTTCTCCGATATTCCTATATTCGCACCA
TTTCTTTCAATTACACCCATGAATTGGGGTTACGTATCTGAACCACAACAAAAGGCCTGT
CGTAATTTGAGAGATCATGTTTGTTATATGCCTCGAGGCAAAGTTCTCGGGGGCAGCAGC
GTACTTAACTTTTTAATATACCAAAGAGGTCATCCCGAAGATTATAACGATTGGGTCAGG
ATGGGTAACGAGGGTTGGAGCTACAATGAAGTCTTGCCATACTTTAAGAAATCCGAAAAT
ATACATATAAAAGAACTTCTAAACTCCACTTATCATGGCAAAGGAGGTTATTTAGACATT
GATTATTCTTCATTTTCAACGCCACTCAATGATGCATTCAAGAACGCTGGTCACGAACTC
GGGTACGAATGGAATGACCCCAATGGAGAAAATGTAATCGGTTTTTCAAAACCTCAAGCG
ACAATAAGAAAAGGAAGACGGTGTAGCTCATCAAAAGCATTTTTAGAACCCGTAAGGTAT
AGAAGAAACCTAAAAGTATCTAAATTTTCCACAGCAACGAAAATATTAATCGACCCTCTT
ACGAAAAGAGCTAATGGAGTGGAATTTATAAAAAATAATAAAATAAAACGTATATACGCC
CGTCGTGAGGTTGTACTTGCTGGTGGCACAATAGGGTCTGCCCAATTATTAATGCTATCG
GGAGTGGGCCCTAAAGAACACTTAAGCGAACTTGGAATACAAACTATAGTCGACCTGCCT
GTAGGCTACAACCTTCAAGACCATGTAACCTTTTCGGGTAATGCGTTTATTGTCAATACC
ACTGGACTCTGTGTAAACGATATGATAGCTGCATCTCCAGCATCAGCTGTGTCATATATG
TTGGGAGGCGGTCCATTAACCATACCGGGGGGTGCCACCGGACTTGCCTTCATACAAACG
GACTACGCAAAAGACATGAATGGAAGGCCCGATATAGAAATGGTGATGGGCGCTGGATCC
CTGGCAGGAGATCTGCTCGGAATTATACGGTCTATGCTTGGTGTAACTGATGAATGGTAC
CGAGAAGTTTACGGTTCTCTCCCACTCAATGAGAGACAGCAGTCGTTCGCTTTGAACCCG
GTTTTAATTCGACCTAGAAGCGTCGGCCGTATGAAACTTAGTTCATCAAACTTCACAGAT
CAACCAAGAATACAACCGAACTATTTTGAACATCCCGACGATTTACAAGCCATTAAGGAG
GGAGTGAGATTTGCACAAAAAATTATACAAACAAAAGCGTTCCAACGATACGGGACGCGA
CTCCACAATACACCATTCCCAAATTGCCGACACTTGACCTTCGACTCGGACGAGTATTGG
GAGTGCGCCATCGAACAGACCTCCATCACGCTAGATCACCTGGCCGGGACCTGCAAAATG
GGGTCACAAGGAGACCCATCAGCGGTGGTGTCTCCGCGTTTACTGGTTCATGGAATTCAT
GGTCTGAGGATAGCTGACGCCTCCATAATGCCTCGCATACCAGCGTCCCATACACATGCA
CCCGTCGTCATGATAGCCGAAAAAGCTGCCGATATCATTAAGCAGGATTGGAAGCAACCA
ATTCAACAATTATGA
Protein sequence:
MKLLIFVYIILKTTEASTERYNFLDFWTNLFRPIPRLAKEGFVPDYTPKDGQEYDFIIIG
AGSAGCVLANRLSEISEWKVLILEAGGNENYFSDIPIFAPFLSITPMNWGYVSEPQQKAC
RNLRDHVCYMPRGKVLGGSSVLNFLIYQRGHPEDYNDWVRMGNEGWSYNEVLPYFKKSEN
IHIKELLNSTYHGKGGYLDIDYSSFSTPLNDAFKNAGHELGYEWNDPNGENVIGFSKPQA
TIRKGRRCSSSKAFLEPVRYRRNLKVSKFSTATKILIDPLTKRANGVEFIKNNKIKRIYA
RREVVLAGGTIGSAQLLMLSGVGPKEHLSELGIQTIVDLPVGYNLQDHVTFSGNAFIVNT
TGLCVNDMIAASPASAVSYMLGGGPLTIPGGATGLAFIQTDYAKDMNGRPDIEMVMGAGS
LAGDLLGIIRSMLGVTDEWYREVYGSLPLNERQQSFALNPVLIRPRSVGRMKLSSSNFTD
QPRIQPNYFEHPDDLQAIKEGVRFAQKIIQTKAFQRYGTRLHNTPFPNCRHLTFDSDEYW
ECAIEQTSITLDHLAGTCKMGSQGDPSAVVSPRLLVHGIHGLRIADASIMPRIPASHTHA
PVVMIAEKAADIIKQDWKQPIQQL