| New model in OGS2.0 | DPOGS204389 |
|---|---|
| Genomic Position | scaffold131:- 156615-157769 |
| See gene structure | |
| CDS Length | 1155 |
| Paired RNAseq reads | 204 |
| Single RNAseq reads | 581 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007843 (1e-159) |
| Best Drosophila hit | deformed wings (3e-15) |
| Best Human hit | zinc finger protein 235 (6e-18) |
| Best NR hit (blastp) | PREDICTED: zinc finger protein 347 [Bos taurus] (2e-20) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 347 [Bos taurus] (3e-24) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0005622 intracellular GO:0003677 DNA binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL40197 |
Nucleotide sequence:
ATGTCTAAAAAAGAATCGATTGATCAAAACGAAAGAAAGTATGATACCAGCGATTTTGAT
AATATTATATCACCGCACAGTATATTTGAATCATCAAAACCTAAACACCAGGAATTACCG
AGTTTATCAGGATTTTCTAATGCTGAAACTCAAACAAAACAAAGTGACTTAAAAGGACAA
GGGATCCAAAGCGGTCTTGGTACCTGGCATTATAATCCCTGGTGGATGCTAGCGAGTACA
TCTCGAAGTGTACAATCACAAGATAATTTCTCAGAAAGCAGTGACCAAACAAAAGTAAAA
CAAGAACCCAGCGGTGCAGGTACTCCCGATCACGACACTCTACAAAGTGATCTGGATCAA
TTTCAAACCACACAAACACCTCCACCTCCAGCAGGACTGGATTCCTTTTGTGATGACTGT
TCCGATCCTTTTTGTGATTCGAGTATATCTATCTGTCGAAAACTTTTCCATTGCCCACAC
TGTCGAAAAAGCTATCCTACGATTCTCGAATTTAATACACATCTAACGGGTGTTCATCCA
GCACAAAAACCATTTAGATGCCAAATCTGTTTGGAACCATTTTACAAAAAATCTCATTTA
CGGAGACATTTAGATTCGAACCATACTCGAAAAGATGTGAACAAATGTACTGTATGCTCA
AAATATATAAAGGATAAAAGTAACTTACGTAAACATATGCAAGTACACACCGGCCGCGTA
CCCCAAAAACAGTTCAAGTGTGACCTTTGCAATAATAAACGTTACATGTCATTAGATAGA
CTCAACAATCACAAGGTGGTTTGCACGGGTGAGAAAGTACTAAAGTTTTGTGATATGTGT
ACTAAGGTATTTGACAACTCGAGATCCTTGAACAGCCATAAGAAGGTTCATGCTAGGGAA
CTAAAATGTGACATTTGTGGAGAACAGCTACGCTCTTTAGAGCAATTTAACAGCCACAAA
ATGATATGTTTAGGTAAAGCACAGGAAGCTGGTAGTAGTGGTTCAACAAATGCAGCTACA
CCACCACTAAACAATTGTTGTACCCAGCCAGGACTGTGTGAGCATGATAAACCAGCCTAC
CTAAACATACCTAGTTATGCCGCCGGAAGAGTTATTGATGCTACTCTGTCATCTTTAAAA
TCAGAAATGAACTAG
Protein sequence:
MSKKESIDQNERKYDTSDFDNIISPHSIFESSKPKHQELPSLSGFSNAETQTKQSDLKGQ
GIQSGLGTWHYNPWWMLASTSRSVQSQDNFSESSDQTKVKQEPSGAGTPDHDTLQSDLDQ
FQTTQTPPPPAGLDSFCDDCSDPFCDSSISICRKLFHCPHCRKSYPTILEFNTHLTGVHP
AQKPFRCQICLEPFYKKSHLRRHLDSNHTRKDVNKCTVCSKYIKDKSNLRKHMQVHTGRV
PQKQFKCDLCNNKRYMSLDRLNNHKVVCTGEKVLKFCDMCTKVFDNSRSLNSHKKVHARE
LKCDICGEQLRSLEQFNSHKMICLGKAQEAGSSGSTNAATPPLNNCCTQPGLCEHDKPAY
LNIPSYAAGRVIDATLSSLKSEMN