| New model in OGS2.0 | DPOGS208364 |
|---|---|
| Genomic Position | scaffold466:- 11944-13165 |
| See gene structure | |
| CDS Length | 984 |
| Paired RNAseq reads | 3 |
| Single RNAseq reads | 7 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012234 (2e-162) |
| Best Drosophila hit | CG32105 (1e-96) |
| Best Human hit | LIM homeobox transcription factor 1-alpha (5e-52) |
| Best NR hit (blastp) | PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum] (1e-136) |
| Best NR hit (blastx) | LIM homeobox transcription factor 1, beta [Tribolium castaneum] (8e-128) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR001781 Zinc finger, LIM-type IPR001356 Homeobox IPR009057 Homeodomain-like IPR017970 Homeobox, conserved site IPR012287 Homeodomain-related |
| Orthology group | MCL11816 |
Nucleotide sequence:
ATGCGAGTAGGCGATTTATCTTGGCACGAACACTGCCTGAGTTGCTGTGTCTGCGGCTGT
CCCCTTGCCCATACATGTTACACTAGAAATGCGAAACTATATTGCAAACCAGATTATGAC
AGATTATTCGGCGTCAAGTGTACTCGCTGCGGAGACAGATTGCTACCCCAGGAGATGGTC
ATGAGAGCGCAGCAGTACGTCTTTCACATTCAATGCTTTGTTTGTGTCATGTGCTGCCAA
CCTCTGCAAAAAGGCGAACAATATGTCATCAGGGCTGGACAGATATTTTGCAGACAAGAC
TTTGAGAAAGAAATGTATCTGATGCAACATGCCGAAGATGATATGATAATAGATGATTCG
GAGCGGCCTCGTGACGGAAGGAGGGGACCAAAACGCCCCAGAACTATACTAACATCAGCT
CAGCGACGGCAATTCAAAGCTTCTTTTGAAGTAAGCCCGAAACCGTGCCGCAAAGTACGA
GAAGCTTTAGCTAAAGACACGGGATTGAGTGTGAGAGTGGTCCAGGTGTGGTTCCAGAAT
CAGAGAGCTAAAATGAAAAAGATACAACGCAAGGCGAAACAAGAAGGTGATAAAAATAAT
GACAAGGACAAAGACAAAGATGAAAAGAGTATAAAACAAGAGTCGCCCTCCAGTGAACAC
GGGAATTATCTTGGCTTGGACAACTCTTATTCAGCTTCTAGTCAACCACTCAACCCGAAT
TTGCCATATTCTCCTGATGACTATCCAGCTCACTCCGGAGACAGCTTCTGCAGTTCGGAT
ATTTCTCTTGATGGGAGTAATTTCGATCAACTTGATGAAGGTACTTCTGATACCATGAGC
CTACAGAACTTGGAGGTACCTCACCTTCCTCATCATGGGAACCATTCGTCACACGAGCCC
CTGAATCTTGGCACAGGGGCTGTTGTCAACCCCATCGATAAGTTATATCTAATGCAAAAT
TCATATTTTAGTACAGATCATTGA
Protein sequence:
MRVGDLSWHEHCLSCCVCGCPLAHTCYTRNAKLYCKPDYDRLFGVKCTRCGDRLLPQEMV
MRAQQYVFHIQCFVCVMCCQPLQKGEQYVIRAGQIFCRQDFEKEMYLMQHAEDDMIIDDS
ERPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQN
QRAKMKKIQRKAKQEGDKNNDKDKDKDEKSIKQESPSSEHGNYLGLDNSYSASSQPLNPN
LPYSPDDYPAHSGDSFCSSDISLDGSNFDQLDEGTSDTMSLQNLEVPHLPHHGNHSSHEP
LNLGTGAVVNPIDKLYLMQNSYFSTDH