| New model in OGS2.0 | DPOGS205452 |
|---|---|
| Genomic Position | scaffold494:- 68262-73824 |
| See gene structure | |
| CDS Length | 1806 |
| Paired RNAseq reads | 2923 |
| Single RNAseq reads | 6836 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008392 (0.0) |
| Best Drosophila hit | GTP-binding protein (3e-178) |
| Best Human hit | signal recognition particle receptor subunit alpha isoform 1 (0.0) |
| Best NR hit (blastp) | signal recognition particle receptor alpha subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | signal recognition particle receptor alpha subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005525 GTP binding GO:0004872 receptor activity GO:0016020 membrane GO:0005783 endoplasmic reticulum GO:0000166 nucleotide binding GO:0006614 SRP-dependent cotranslational protein targeting to membrane GO:0005785 signal recognition particle receptor complex GO:0006886 intracellular protein transport GO:0003924 GTPase activity GO:0017111 nucleoside-triphosphatase activity GO:0005515 protein binding GO:0005047 signal recognition particle binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR013822 Signal recognition particle, SRP54 subunit, helical bundle IPR003593 ATPase, AAA+ type, core IPR000897 Signal recognition particle, SRP54 subunit, GTPase IPR011012 Longin-like IPR007222 Signal recognition particle receptor, alpha subunit, N-terminal |
| Orthology group | MCL13413 |
Nucleotide sequence:
ATGTTGGATCTATTTAGCATATTTAGTAAAGGAGGAATCGTCCTGTGGTGTTTTCAGAGT
ACCAGCGATATATTCTCGCCTTCTGTTAACGCTCTTATACGTAATGTTATCTTACAGGAA
CGAACGGGCAATAATACGTTTAGCCATAACGCTTTAAGTCTCCAATACAAACTCGACAAT
GAGTTTGAATTAGTTTTCGTGGTAGCTTATCAACGTATACTACAATTATCTTACGTCGAC
AAATTTCTAAATGATATACACTTGGAGTTTAGGGACAAATACAAAAATGAATTGCAAGGT
GGCCAACATAACATGGACTTTGATTTCAAAACTACATTTGAGAGTGTTCTCAAGCAGTGT
GAACAATGGGCAAAAACACAGGCTCAGATTCCGAAGCAGATGCGATCATTTGAAGACTCA
CAGAAGTCTAAAAAGACTGTCGCCTCTATGATTGAAAGGAAAGGAGATGAAAAAAATAAA
AAATCTGTGAAAATAATAGAAAACAAAAGCATTCCCAATGGCAAGGTAGAGGAGCCAGAG
GCGGACAACGACTTGATAGCTGCCAACAGAGCTAAACTGGCACAGAAAATGGCAGCCAAA
AACAAAAAGGAAGCCAAAAAATCTCCAAAAAGTCCAAAAGCAACAGATCGTGTGAAAAAG
CCACGTGTCTGGGAACTGGGAGGTGATTCACGTGACTTACCCTCACTGGACTTCAGTACT
GATAAAGAAAGTTTTGGAGAAATAGCCCCCGACACACAGTTGGTGGGTCAAATGAAAGGC
GCTATTCGCGATTTGGAAGTCGAAGAATCTGATGCAAGCAGTTCTGAAGAAGAAGAGACA
CATCAACCCAGCCCCAAGAAGACGGGGGGAATGTTCAGCATATTTAAAGGTTTGGTTGGC
TCCAAAGCACTTACTGAGGAATCAATGCGGCCAGTGTTGGACAAGCTAAGAGATCACCTC
ATAGCCAAGAATGTTGCCGCTGATATTGCTAACAAACTATGTGACTCTGTTGCCGTTAAG
TTAGAAGGAAAGGTTTTGGGCACGTTTGATAGCGTCGCTACAACTATCAAAGCGACTCTA
ACGGAGGCGTTAGTACAGATCCTATCTCCAAAGCGTCGTGTCGATATACTAAGGGACTGT
CTCCACGCCAAACAACAAGGAAGACCCTACGTTATGGCTTTCTGTGGGGTGAACGGTGTC
GGTAAATCTACGAATCTTGCGAAGATATGTTTCTGGTTGATAGAAAATCGTCTGTCAGTC
TTGATAGCGGCCTGTGACACGTTCAGGGCTGGTGCAGTGGAACAGCTAAGGACTCATGTG
AGGAGATTGGACGCAATGCACCCGGGGTCCGTCAATCTGTATGAAAAAGGATATGGTAAG
GATGCAGCTGGCATCGCAATGGAAGCTATCAAGTATGCAGCGGATACCAAATATGATGTG
GTTCTCATAGATACAGCAGGTCGGATGCAAGACAACGAACCTCTAATGAGAGCTCTGGCC
AAACTCATTAAGGTCAATGAACCCGACCTAGTACTGTTTGTAGGGGAGGCTTTAGTTGGT
AATGAAGCCGTCGATCAACTGGTTAAGTTCAACCAAGCATTGGCCGACCACAGCTCCTCG
AGCAATCCCCATGTCATCGATGGGATCGTTCTCACTAAATTTGACACGATTGATGATAAA
GTCGGTGCGGCCATCTCCATGACCTACATCACCGGCCAGCCTATAGTTTTTGTTGGCACC
GGACAAACATACACAGATTTGAAAGCTCTTAATGCTACCGCAGTCGTTCATGCTCTTATG
AAATAA
Protein sequence:
MLDLFSIFSKGGIVLWCFQSTSDIFSPSVNALIRNVILQERTGNNTFSHNALSLQYKLDN
EFELVFVVAYQRILQLSYVDKFLNDIHLEFRDKYKNELQGGQHNMDFDFKTTFESVLKQC
EQWAKTQAQIPKQMRSFEDSQKSKKTVASMIERKGDEKNKKSVKIIENKSIPNGKVEEPE
ADNDLIAANRAKLAQKMAAKNKKEAKKSPKSPKATDRVKKPRVWELGGDSRDLPSLDFST
DKESFGEIAPDTQLVGQMKGAIRDLEVEESDASSSEEEETHQPSPKKTGGMFSIFKGLVG
SKALTEESMRPVLDKLRDHLIAKNVAADIANKLCDSVAVKLEGKVLGTFDSVATTIKATL
TEALVQILSPKRRVDILRDCLHAKQQGRPYVMAFCGVNGVGKSTNLAKICFWLIENRLSV
LIAACDTFRAGAVEQLRTHVRRLDAMHPGSVNLYEKGYGKDAAGIAMEAIKYAADTKYDV
VLIDTAGRMQDNEPLMRALAKLIKVNEPDLVLFVGEALVGNEAVDQLVKFNQALADHSSS
SNPHVIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYTDLKALNATAVVHALM
K