New model in OGS2.0 | DPOGS205492  |
---|---|
Genomic Position | scaffold494:+ 74317-77905 |
See gene structure | |
CDS Length | 3003 |
Paired RNAseq reads   | 5680 |
Single RNAseq reads   | 15690 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008426 (2e-170) |
Best Drosophila hit   | Rpn2 (0.0) |
Best Human hit | 26S proteasome non-ATPase regulatory subunit 1 isoform 1 (0.0) |
Best NR hit (blastp)   | 26S proteasome non-ATPase regulatory subunit 1 [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 1 isoform 1 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0008540 proteasome regulatory particle, base subcomplex GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0004175 endopeptidase activity GO:0042176 regulation of protein catabolic process GO:0030234 enzyme regulator activity GO:0005488 binding GO:0006974 response to DNA damage stimulus |
InterPro families    | IPR016024 Armadillo-type fold IPR002015 Proteasome/cyclosome, regulatory subunit IPR011989 Armadillo-like helical IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
Orthology group | MCL13533 |
Nucleotide sequence:
ATGAATATCACATCCGCTGCGGGGATAATATCCCTGCTTGATGAGCCTATGCATGAAGTG
AAAAAGTTCGCTCTAAAGAGATTAGACAACATCGTAGACGAATTCTGGCCGGAAATTTCT
GAATCAATTGAAAAGATTGAAATTCTACACGAAGATAAAGTTTTTTCACAGCACCAACTG
GCTGCTTTAGTGGCAAGCAAAGTTTATTATCATTTGGGTGCATTCGAAGACTCTCTAACA
TACGCGCTAGGAGCTGGGGAGTTGTTCGATGTAAACGCAAGGAACGAATATGTCGACACC
ACGATTGCAAAGGCCATCGATTTCTATACACAGAAACGTAAAGCCCTGTTCATTGATAGT
GCCTGTGAGACCATTGACCCTCGACTGGAGGCTATCGTGAACCGAATGTTCCAACGGTGT
CTTGATGACGGTCAATACAGGCAGGCCCTCGGTCTGGCGTTAGAGACGCGACGAATGGAC
ATCTTTGAAGAATCTATTATGAAGTCTGATGATGTGTCAGGCATGCTGCAGTACGCATTT
ACTGTGGCAATGAGTCTTCTCCAGAACAGAGGTTTCCGAAGCACAGTCCTCCGATCTTTA
GTAGGTTTATACCGAGGTCTGAACATTCCAGACTATGTCAATATGTGTCAATGTCTCATC
TTCTTAGAGGATCCATTATCAGTCGCAGAAATCTTGGACAAATTAACTCACGGCCCACAA
GATTCAGTACTAATGGCTTACCAAATTGCATTTGATCTGTATGACTCAGCAACTCAACAA
TTTTTAGGGCGAGTTCTACAGGCCCTTAGAATTACAGCACCTATACCGAGTGCTTTGGGC
GGTAAACCCCAACCGCAAGGTGGCCCTTTCCCAGAATCTACTATGGAGGTAGATCAATCA
CCCTCTGAAGAACCTAAGAAACCAGAACGGGATATTGATAGTCTTAATGATGAGGAAAAG
GAACATCAGAGGAGAGTAGAAAAATTAATATCTATATTAGGAGGAGATGTATCTATAGGT
TTACAATTACAGTTCTTAATTAGGTCTAATCATGCGGATATGTTAATTCTAAAGAACACG
AAAGATGCCATCAGAGTTTCAATCTGCCACACAGCTACGGTTATAGCTAATGCATTCATG
CACGCTGGCACGACAAGCGATCAGTTCTTAAGGGATAACTTGGAATGGTTGGCGCGAGCG
ACGAATTGGGCAAAACTGACAGTGACGGCTTCGCTTGGCGTAATACACAGAGGCCACGAG
AACGAATCCTTGGCTCTCATGCAATCTTATCTGCCCAAAGAGGCTGGGCCATCATCTGGC
TATTCTGAAGGTGGCGGCTTATACGCATTAGGTTTGATTCATGCAAACCACGGCGCCAAT
ATCATTGATTATCTTTTAACTCAATTAAAAGACGCTCAGAATGAAATGGTTCGCCACGGA
GGCTGTCTGGGTCTCGGTTTAGCTGCAATGGGCACTCACCGGCAGGACGTTTACGAACAA
CTCAAGTTCAACCTATACCAAGACGACGCAGTTACCGGTGAAGCTGCTGGTATTGCTATG
GGAATGGTCATGTTGGGTTCCCGCAACGCTGCCGCCATCGAGGACATGGTCGCCTACGCC
CAGGAGACTCAACACGAAAAGATTTTGCGTGGTTTAGCCGTCGGCATATCCTTCACCATG
TACGGACGGCTGGAAGAGGCTGATGCTCTCGTCCAACAGCTATTGAGAGATAAGGATCCG
TTATTGCGTCGAGCTGGTTGTTACACCATAGCTACAGCCTACTGCGGCACTGGCAATAAC
GATTCAATTCGTACATTACTTCACGTGGCCGTTTCTGACGTGAACGACGACGTCCGCCGC
GCTGCTGTAACTGCTTTAGGATTCCTACTGTTCAGAACGCCCGAACAATGTCCGTCTGTG
GTGTCACTATTGGCGGAGTCCTACAATCCTCATGTACGGTACGGCGCTGCTATGGCCTTG
GGTATCGCATGCGCCGGTACTGGGAATCGTGAAGCTATCGGACTTCTAGAACCTATGGTC
AAATTTGACCCTGTTAATTTCGTCAGACAAGGAGCGCTTATAGCATCGGCGATGATTTTG
ATTCAGCAGACCGAGGCGCTATGTCCCAAAGTTACATACTTCCGTACGCTTTATTCACAA
GTAATTTCAAACAAACACGAAGATGTTATGGCCAAATTTGGGGCTATATTGGCCCAAGGT
ATCATAGATGCAGGTGGACGGAATGTAACAGTCTCCCTTCAGAACAGAACCGGTCACATG
AATATGTTGGCTGTTGTTGGCATGCTAGTATTCACTCAATACTGGTACTGGTTCCCGTTG
GCTCATTGCCTATCACTTGCTTTTACGCCCACATGCGTGATTGCCCTAAATTCCGATTTA
AAAATGCCACTACTGGAAATGAAATCCAACGCTAAACCATCGCTGTACGCCTACCCAGCA
CCGCTTGAAGAAAAGAAACGCGAAGAAAGAGAAAGAGTCACCACTGCCGTACTAAGTATT
GCCGCAGCCAGAGCGCGCAGACGAGCTCACGGAACAGAGGGTTCCGCTAGCAGTAGTGTG
ACGTCATCGACCACATCTAAGATGGATGTCGATGAAGAAGAGAAGAAGCCTTCCAAATCA
CCAAACCCAAATATAACAGTTCACGGTAAATCCGATAAAGATGCCGGATCGTCGAAAGAA
GGCAAGAAAGACGAAAAGGAAGCAGAAGAAAAAGATGTCAAGGAGAAGAAGGAACCGGAA
CCAAACTTTGAAATTCTCAGCAACCCAGCCAGGGTTATGCGTCAACAACTAAAAACTCTG
ACAGTTGTTGAGGGTTCCGGATACATGCCTTTGAAGGACGTCACTATTGGCGGTATCGTA
ATGTTGAATCATACGGGAGACAGTGAACAAGTGCTTGTGGAACCTGTCGCTGCTTTTGGT
CCGAAAGCTGAAGAAGAAAAAGAACCTGAACCTCCTGAACCATTTGAATACTTGGACGAA
TGA
Protein sequence:
MNITSAAGIISLLDEPMHEVKKFALKRLDNIVDEFWPEISESIEKIEILHEDKVFSQHQL
AALVASKVYYHLGAFEDSLTYALGAGELFDVNARNEYVDTTIAKAIDFYTQKRKALFIDS
ACETIDPRLEAIVNRMFQRCLDDGQYRQALGLALETRRMDIFEESIMKSDDVSGMLQYAF
TVAMSLLQNRGFRSTVLRSLVGLYRGLNIPDYVNMCQCLIFLEDPLSVAEILDKLTHGPQ
DSVLMAYQIAFDLYDSATQQFLGRVLQALRITAPIPSALGGKPQPQGGPFPESTMEVDQS
PSEEPKKPERDIDSLNDEEKEHQRRVEKLISILGGDVSIGLQLQFLIRSNHADMLILKNT
KDAIRVSICHTATVIANAFMHAGTTSDQFLRDNLEWLARATNWAKLTVTASLGVIHRGHE
NESLALMQSYLPKEAGPSSGYSEGGGLYALGLIHANHGANIIDYLLTQLKDAQNEMVRHG
GCLGLGLAAMGTHRQDVYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSRNAAAIEDMVAYA
QETQHEKILRGLAVGISFTMYGRLEEADALVQQLLRDKDPLLRRAGCYTIATAYCGTGNN
DSIRTLLHVAVSDVNDDVRRAAVTALGFLLFRTPEQCPSVVSLLAESYNPHVRYGAAMAL
GIACAGTGNREAIGLLEPMVKFDPVNFVRQGALIASAMILIQQTEALCPKVTYFRTLYSQ
VISNKHEDVMAKFGAILAQGIIDAGGRNVTVSLQNRTGHMNMLAVVGMLVFTQYWYWFPL
AHCLSLAFTPTCVIALNSDLKMPLLEMKSNAKPSLYAYPAPLEEKKREERERVTTAVLSI
AAARARRRAHGTEGSASSSVTSSTTSKMDVDEEEKKPSKSPNPNITVHGKSDKDAGSSKE
GKKDEKEAEEKDVKEKKEPEPNFEILSNPARVMRQQLKTLTVVEGSGYMPLKDVTIGGIV
MLNHTGDSEQVLVEPVAAFGPKAEEEKEPEPPEPFEYLDE