| New model in OGS2.0 | DPOGS205493 |
|---|---|
| Genomic Position | scaffold494:+ 78876-79310 |
| See gene structure | |
| CDS Length | 435 |
| Paired RNAseq reads | 138 |
| Single RNAseq reads | 1007 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008427 (7e-47) |
| Best Drosophila hit | ND |
| Best Human hit | PREDICTED: nuclear nucleic acid-binding protein C1D-like (3e-10) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL002933 [Aedes aegypti] (6e-23) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL002933 [Aedes aegypti] (1e-21) |
| GeneOntology terms | GO:0003723 RNA binding GO:0006364 rRNA processing GO:0000178 exosome (RNase complex) GO:0005634 nucleus GO:0003677 DNA binding GO:0005737 cytoplasm |
| InterPro families | IPR007146 Sas10/Utp3/C1D IPR011082 Exosome-associated factor Rrp47/DNA strand repair C1D |
| Orthology group | MCL15397 |
Nucleotide sequence:
ATGGATTGGGACCTCAAATACGGCGAACTTGCCAACGACAAAGAATATGTAAACAAGTGC
GAAGATTTGAAGGAAAATTTGATGGATTTGCAAAAGGTATTGGACAAATTGTTGCCTTTA
AAGCAACATTATGAAAAAATGTCATTACCGGCTCAGATTGAATTGGACTTGTTTTTGGCT
TTCACGTTAAATTCATTGCAATGGGTAACTCTGCGAATACAGGGCGTGGATCCGACGACG
CATCCCATTAAAGACGAACTGCTCCGAGTAAAAGCTGCCATGCTAAAGTGGAAAGAGGTA
AAAGACCGCGTAAAAAGGCCGACAGTCGATTTGCAAGCTGTGAAAAGATTCATCAGGAGC
GGACTATACGATCCATTCAGAGCCATGGGCAATCCGGCTCACTTGAAAATAATTGAAGTA
ATGGAAGAAGATTAG
Protein sequence:
MDWDLKYGELANDKEYVNKCEDLKENLMDLQKVLDKLLPLKQHYEKMSLPAQIELDLFLA
FTLNSLQWVTLRIQGVDPTTHPIKDELLRVKAAMLKWKEVKDRVKRPTVDLQAVKRFIRS
GLYDPFRAMGNPAHLKIIEVMEED