| New model in OGS2.0 | DPOGS212514 |
|---|---|
| Genomic Position | scaffold4166:+ 307-8060 |
| See gene structure | |
| CDS Length | 1344 |
| Paired RNAseq reads | 69 |
| Single RNAseq reads | 189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001706 (3e-08) |
| Best Drosophila hit | CG15269 (4e-19) |
| Best Human hit | zinc finger protein 836 (6e-25) |
| Best NR hit (blastp) | PREDICTED: zinc finger protein 45-like [Danio rerio] (7e-27) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 502-like [Danio rerio] (1e-29) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL25343 |
Nucleotide sequence:
ATGTCGCTCTCGATTACGGAATATTCACACAACAAGGCGATCGATCGCGAAGTGAACAAC
GCCGAGAGCGAGGCACTACTGTCGCCTTTGGACGACGTCGCAAAAAATATAATACGGGTC
GTTAATATCGAGAAGGCGTTCAGATGCGAGTACTGCGAAGATGTATTCTATTTGGAAGAC
GCTTTAAACAATCACAGGGTTATTCACAAGGGTGTGCAGAATCCGTTTACCTGTCACATT
TGTAAAGTCAGTTTCGCCACATATTCAAGTTGGAGTGTTGCGTATCACAGGAAGAAAGTT
CACGGAAAATCCGGCCAAGACGAGAATGGGGGTATTACTAAAATTATAAGAGACAACAGG
ATCCCGTGTCGTGATTGCGACCAGACGCTGCCAAACAAAATTGAACTCTACAAGCATAGA
AAGAAGGAGCACTGCGACGAAGCTTTGGATATGGACAAAGAAGGTAACTGGTCCGACCAA
ATAGACGACGCCAGCACCACCGTCTGCAGCAAGTGCGGGCACAACCTGCACAACGTGACG
GCGCTGCAGAAACACGTCAAGGAGGTCCACGGTTACGCCAACCCCCACTCGTGTCCCGTG
TGCGGGCGCAGTTTCCGTTCAGCTTCCATACGTAACGAGCACGTCAGGACTCACACGGGG
GAACGCCCGTACCCCTGTGATGTGTGCGGGGTAGCCTTTAGACGATCAACGGCGATGCGT
AATCATCGTCTCATTCACACGGGGGTCCGAGCGTGGGCTTGTCTGAGATGCCCAAAGAGA
TTCCGCATCAAATCAGACCTCAAGACCCACTTGAGACTGAAGCACCCGGCCCATTTGGCT
GTTATTGAGGTCGAAGGTACCACGGCGTCCTCGGAGGACGTGCAGCAGCACCTGACCTTG
AACAACATCAACCAGGACAAGGTCATTGAGATAACTATGATAACGTTCGCTAAGGATACA
ACAAACATAGTTCCGAACTCATCCCGGGCCCTCGGCCTGCTGAATGACGTGCCAAGGACA
CGAGTGGTGTGGGAGAGACCGGCGCAATACTACGATGTGTTCCAACCTCGTCGTGGCAGG
GGTATCGCCAAGACCCCGCGGCGGCCGAAAATATTAAGAGGGGAAGATCTACCCCAGGAC
GAGAACTACCCCCTGGACACTGATAACACGGAGACGGAGACTGATAAGATCCCAGATAAC
ATCTATCCTGTGACCTTGAACGCGGACGGAGAGTTCCAAAACCTATCAACGCTGAACGTG
CAACTTCTGCTACAAGATGGCGCTCTGGTGAACGGCAACCAGATGGTGGAACTGCAGCTG
AACGACGAAATGCTGCTGGAGTAG
Protein sequence:
MSLSITEYSHNKAIDREVNNAESEALLSPLDDVAKNIIRVVNIEKAFRCEYCEDVFYLED
ALNNHRVIHKGVQNPFTCHICKVSFATYSSWSVAYHRKKVHGKSGQDENGGITKIIRDNR
IPCRDCDQTLPNKIELYKHRKKEHCDEALDMDKEGNWSDQIDDASTTVCSKCGHNLHNVT
ALQKHVKEVHGYANPHSCPVCGRSFRSASIRNEHVRTHTGERPYPCDVCGVAFRRSTAMR
NHRLIHTGVRAWACLRCPKRFRIKSDLKTHLRLKHPAHLAVIEVEGTTASSEDVQQHLTL
NNINQDKVIEITMITFAKDTTNIVPNSSRALGLLNDVPRTRVVWERPAQYYDVFQPRRGR
GIAKTPRRPKILRGEDLPQDENYPLDTDNTETETDKIPDNIYPVTLNADGEFQNLSTLNV
QLLLQDGALVNGNQMVELQLNDEMLLE