| New model in OGS2.0 | DPOGS200137 |
|---|---|
| Genomic Position | scaffold328:+ 83512-84941 |
| See gene structure | |
| CDS Length | 1107 |
| Paired RNAseq reads | 17 |
| Single RNAseq reads | 57 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002782 (9e-108) |
| Best Drosophila hit | CG18095 (5e-06) |
| Best Human hit | leucine-rich repeat-containing protein 23 isoform a (1e-27) |
| Best NR hit (blastp) | PREDICTED: similar to axonemal leucine-rich repeat protein [Tribolium castaneum] (1e-44) |
| Best NR hit (blastx) | PREDICTED: similar to axonemal leucine-rich repeat protein [Tribolium castaneum] (9e-46) |
| GeneOntology terms | GO:0005515 protein binding GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | MCL18518 |
Nucleotide sequence:
ATGTTAAAATCACACTTTAATCTACAACAAGACGATGAGAAAGAACTGGAAGAGACTCAA
GATCATAAAAAAGATGAAGAGATTGAACTGATGGCCGAGGAGTTGGAACACGAACAGCTG
GAAGAGGATGCTGCTAAAGAAATTATACCCAGTTACCCGGAAAGAATACTCAAGAGATCA
GAGATTAGCATCAGGCTTAGTTTACTAGGAAAAACTGCTGAAGGAGATGGGTACACATAC
CTTAAAGCTGCCTGCACCGGCATGGGCCTAACAGACATCACGGCTGTAAAATCATTCCAA
CACTTACAATTCCTCGATGTGTCGAATAACAACTTAAATTTGGCCAGTCTACAAGCTATC
ACGGAACTGCCGTATCTGGTACTGATACACGCTGACAAAAACCAACTTTATTCCGCCGCA
TTAAGGACTATGAAGTACATGCAGGTTGTTATAATGAACAACAACAACTTAACTTCAGTA
TGGGATGTGTACCAACCGGAATTGTCCACTTTGGAAGTCGGATACAATAAAATAAAGAAT
ATTAGATTCGAAGGGAACATGCCCGAAATAAAATGCTTGGATTTCCGATATAATTTCATA
GAGGACATTTCCAATCTGAACTTTCCAAATTTGGACAGTCTGTATTTGGCTGGTAATAAA
ATTCAAAGTCTCATTGGTATAGAGAGATTGGTGAATCTGAGAATACTTCACTTAAGGAAT
AATCCCATTAAACTTTTGTACGGTTTTGAAGAGGGTATGAAGAAATTGCAGTACATAAAT
CTAAGGAACTGCAAAGTGGCAACATTGAAGCAAATCAAGAAACTACGGGTGTTAGAAACA
TTGACAACATTAGTGATAAAAGGTTGTCCATTCATGGGAGGTACTGGGGAAGAAGATGCT
GAAGTTGGATCTGAGGAAGAGGATCCAGAATTGAGGGTTGAGGTGCTGGCAGCGCTGCAG
AGACTGAAGCGGCTTAATAAAGGAGTAGTTTCCCCCGAAGAAAGAGAGGAAGCAAAGGAG
CTGATGAAGCAGTGGCTCGAAGAAGGTGAAAATGATGAAGAGGAATTGCAAGAAGAACAA
CACGATGAAGATTCTAATGCAGATTGA
Protein sequence:
MLKSHFNLQQDDEKELEETQDHKKDEEIELMAEELEHEQLEEDAAKEIIPSYPERILKRS
EISIRLSLLGKTAEGDGYTYLKAACTGMGLTDITAVKSFQHLQFLDVSNNNLNLASLQAI
TELPYLVLIHADKNQLYSAALRTMKYMQVVIMNNNNLTSVWDVYQPELSTLEVGYNKIKN
IRFEGNMPEIKCLDFRYNFIEDISNLNFPNLDSLYLAGNKIQSLIGIERLVNLRILHLRN
NPIKLLYGFEEGMKKLQYINLRNCKVATLKQIKKLRVLETLTTLVIKGCPFMGGTGEEDA
EVGSEEEDPELRVEVLAALQRLKRLNKGVVSPEEREEAKELMKQWLEEGENDEEELQEEQ
HDEDSNAD